Rhipicephalus sanguineus (brown dog tick): 119387616
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Entry
119387616 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119387616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsan03041
]
119387616
Spliceosome [BR:
rsan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119387616
Complex C
U5 SnRNP specific factors
119387616
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
GTP_EFTU_D2
EFG_III
MMR_HSR1
Roc
Septin
Ras
EFG_IV
Motif
Other DBs
NCBI-GeneID:
119387616
NCBI-ProteinID:
XP_049269541
EnsemblRapid:
LOC119387616
LOC119387617
LinkDB
All DBs
Position
3:163067950..163093107
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AA seq
779 aa
AA seq
DB search
MDADLYDEFGNYIGPELESDSDDDEADRYDRQDADAQELQEVTGLHSSQEFCARNRGCVX
CKIAVCTQDDDMGDMQVVLHEDKKYYPSAVEVYGPDVETIVQEEDAQPLTEPIIAPIKHR
KFSFVEQDLPLTTYDLEFLTDLMDNSELIRNVALVGHLHHGKTSFVDCLVEQTHPHLRAK
ECKNLRYTDTLYTEQEARVSIKASPVTLLLQDLKQKSFILNVFDTPGHVNFSDEVTAAIR
ICDGVVIFIDAAEGVCLNTEQLLKHAVQEKLAICICINKIDRLMLELKLPPQDAYYKLRN
VVDEINSLITLYSEDPEQQQVSPLLGNVCFASSLYSLCFTLRSFACMYSQTFGGVNVTEF
ARRLWGDIYFSNKTRKFTKKPPHSSAQRSFVEFILEPLYKLFAQVVGDVDECLPKLLDEL
GVKLSKTEMKLNVRPLLRLVCSRFVGEFTGFVDMCVNHVPPPARVTREKIECIYTGPLES
ELGEAMLKCDPDGPLIVHTTKQYSTQDATSFHVFGRVMSGTLHANQDVRILGENYTSTDE
EDSRVLAVGRLWVHESRYKVEVNRVPAGNWVLMEGIDQPVVKTSTIVDVGIQEELFIFHP
LRFCTHSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLVNTKVEESGEHVIFGTGELYLDC
VMHDLRKMYSEIDIKVADPVVCFCETVVETSSLKCFAETPNKKXEITMIAEPLERGLAED
IENEVVQITWNRKRLGEXFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPPEVTRFS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgacttgtatgatgagttcggtaattacataggacccgaacttgagagcgat
tcggatgacgatgaggcagaccggtatgatcgccaggacgccgatgcgcaagagttgcaa
gaggtaacgggcttgcactcctcgcaagaattctgtgcacgaaatcggggctgcgtctga
tgcaaaattgccgtgtgtacgcaggatgatgacatgggagacatgcaagtcgtgttgcac
gaagacaaaaaatactacccttctgcagtggaagtgtatggacctgatgttgaaactatt
gtgcaagaagaggacgcccaaccgttgacagagcccatcattgctcccataaagcaccga
aagttttcctttgtggagcaggaccttcctttgacaacctatgatcttgagttcctgact
gacctgatggacaactctgagctcatacgtaatgtggctctcgttggtcacctccatcac
ggcaagacctcatttgtcgactgtctggtagagcaaactcatccacaccttcgggcaaag
gaatgcaaaaatctgaggtacactgacacgctgtacacagagcaagaggcaagagtgagc
atcaaagccagccctgtcacacttctcctgcaagacctcaaacagaagtcatttattttg
aacgtctttgacacaccaggtcacgtcaatttttctgatgaggtgactgcagctatcagg
atttgtgatggtgttgtgatcttcattgacgctgctgaaggagtctgtctgaacacggaa
cagctgctcaagcatgccgtccaagagaagttggccatctgcatctgcatcaacaagatt
gacaggctgatgctagagctgaagttgccaccccaagatgcctattacaagttgaggaac
gtcgttgatgagataaattctttgatcacgctatactctgaggaccctgaacagcagcag
gtgtcgcctcttttgggcaacgtttgctttgccagttccctctacagcctctgtttcacg
ctgcgttcatttgcctgcatgtactcgcaaacctttggtggagtcaacgtcacagaattt
gcgaggcggctctggggagacatctacttcagcaacaaaacgcggaagtttacgaagaag
ccccctcacagttcagcacagaggagctttgtggagttcattctggagcctttgtacaag
ctttttgcacaggtggttggtgatgtcgacgagtgtctgcccaagctccttgacgagttg
ggagtcaagctgtccaagacggagatgaagctcaacgtcagacctctgctgcgtctcgtc
tgctcacgattcgttggagaattcaccggctttgttgacatgtgtgtcaaccatgtgccg
ccaccagctcgtgtgactcgagagaagatcgagtgcatctatacgggccctttggaatcc
gagcttggggaagccatgctcaagtgcgaccctgacggcccgctgattgtacacaccaca
aaacagtactcaactcaagatgccaccagtttccacgtgtttggacgtgtaatgagtggt
acactgcatgccaatcaggatgtgcgcattcttggtgagaactatacgtccacggatgaa
gaggactcccgtgtgctagctgtcgggaggctctgggtccacgaatcaaggtacaaggtt
gaggtaaaccgggtcccagcgggcaactgggtgctcatggaaggcattgaccagccagtg
gtgaagacctcaaccatagtggacgttggcattcaagaggagctcttcatctttcatcct
ctgcgcttctgcacacattccgtcatcaagattgccgtagagcctgtgaacccatcagag
ctgccaaaaatgctggacggtttacggaaagtcaacaagtcgtatccccttgtgaacacc
aaggtggaggaatctggagaacatgtcatcttcggaacaggagaactgtatcttgactgc
gtgatgcacgacttgaggaagatgtattcagaaattgacatcaaggttgctgacccagtc
gtctgcttctgtgagacggttgtggaaacttcatcgctcaagtgttttgcagaaactccc
aacaagaagtgagaaatcaccatgattgctgagccactggaaaggggcctggcagaggac
attgagaatgaggtggtgcagatcacatggaaccggaaacggctgggagaantcttccag
accaagtatgactgggatttgctcgcagctcgttccatctgggcatttggacccgatgct
acaggccccaacattcttgtggatgacaccctgcctcctgaggtaactcggttttcttga
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