Rhipicephalus sanguineus (brown dog tick): 119406328
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Entry
119406328 CDS
T07382
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan04120
Ubiquitin mediated proteolysis
rsan04140
Autophagy - animal
rsan04144
Endocytosis
rsan04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119406328
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119406328
04140 Autophagy - animal
119406328
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119406328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsan04131
]
119406328
04121 Ubiquitin system [BR:
rsan04121
]
119406328
Enzymes [BR:
rsan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119406328
Membrane trafficking [BR:
rsan04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119406328
Ubiquitin system [BR:
rsan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119406328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
Prok-RING_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
119406328
NCBI-ProteinID:
XP_037528996
LinkDB
All DBs
Position
10:37159602..37160780
Genome browser
AA seq
392 aa
AA seq
DB search
MTDGWEYTLTGFSEFLEMRRVAFAEPMPATRLCGVCGLLPSRTSQLPCGHVFCESCKAQL
PQGKDRCCPFEGKKFADSEVHSMSIELRELEQRRIVCAAGSRVCGFSGKLSELADHLARC
GSGETKCGKCQRPVFRNLAVDHYRRCTGPLCAANSEADAKGMGDAAKMADVERSTRQLML
SKGVDLEAVFSCFTNALAEKVASLERQLLEVQKKSNDKQSSVAAETKAAVIHGPYRAVSR
AGVLITTCKFADICAGLDSLNEKKNELAKSTDTYSLGGYTFKLNCKFSKDENDMNVAFIL
HLRDGEWDSYVEWPFKKKVTLIIMHPRNEAKDIRLLVDMDDHDLVKKPSAGTWNWGRWTK
KKNWKDIELQGYVDRNALYVNIEFEQADAYRY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggctgggagtacacgctgaccgggttcagcgagttcctcgagatgcgtcga
gttgcattcgccgaaccgatgccggccactcgcctttgcggcgtctgcggcctgctgcct
tcccgaacttcgcagctgccgtgcggccacgttttctgcgagagctgcaaggctcagcta
ccgcaaggaaaagaccgctgttgcccgttcgaggggaagaagttcgccgactccgaagtt
cactccatgagcatcgagctgcgcgagctcgaacaacgccgcatcgtgtgcgcggccggc
tcccgagtgtgcggcttctccggcaaactgtccgagctcgcagatcacctggctcggtgc
ggtagcggggagaccaagtgcggaaagtgccagcgacccgtgtttcgcaacctagccgtg
gatcactaccgtaggtgcaccgggccgttgtgtgcggcgaattccgaagctgatgccaag
ggaatgggagatgctgccaagatggcggacgtcgaaagaagcacgcggcagctgatgctg
agcaagggggtcgacctggaagctgtgttcagctgcttcacgaacgctctggccgaaaag
gtggccagtctcgaacgtcagttgctcgaagtacagaaaaagtcgaacgataagcagtcg
tcggtcgctgccgagacgaaggcggcggtaatccatggaccgtaccgcgctgtttcgaga
gctggcgttttgatcaccacgtgcaagttcgccgacatttgcgcagggctcgactcgctg
aacgagaagaaaaatgaactcgcgaaatcgaccgacacgtattcgctaggaggttacacc
ttcaagctcaactgcaagttctccaaggatgagaacgacatgaacgtcgcttttattctt
catttgcgcgacggcgaatgggacagttacgtggaatggcctttcaaaaagaaggtgacc
ttgatcatcatgcaccccaggaacgaggcaaaagacatccgcttgctggtagacatggat
gaccatgatttggtgaagaagcctagtgcgggtacttggaactggggtcgttggacgaag
aagaaaaactggaaggatattgaactgcaagggtatgtcgacagaaatgccctctatgtc
aacatcgagtttgagcaagcagacgcgtatcgttactaa
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integrated database retrieval system
