Rhipicephalus sanguineus (brown dog tick): 119406771
Help
Entry
119406771 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rsan03037
]
119406771
Cilium and associated proteins [BR:
rsan03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
119406771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
WD40
Beta-prop_EML_2
Zn_ribbon_IFT122
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
NBCH_WD40
Zn_ribbon_IFT122_C
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
TPR_IF140-IFT172
Beta-prop_WDR35_TULP_N
TPR_2
WD40_MABP1-WDR62_1st
TPR_MalT
Beta-prop_WDR75_1st
Beta-prop_SPT8
DUF7501
DUF7560
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
119406771
NCBI-ProteinID:
XP_049276160
LinkDB
All DBs
Position
10:140387661..140461536
Genome browser
AA seq
1214 aa
AA seq
DB search
MRAVALWVDKVHDRENNEQCIYDLVFKPDGSQLIVAAGTRVLVYDTSDGALVQPLKGHKD
AVYCVSYARDGKRFASGGADKQVIIWTASLEGILKYSHHDSIQCLTYNPLTHTLVSCSCS
DFGLWSSEQKSVSKHRTSGRVTSAGWNPDGQFLALGLATGTVSIRGRSGEEVVRIDRPGG
PKAAVWGVCWNPVKEEGVGDVLAVADWAQTLSFYNVAGQQTGRERALGFDPTFISYFPGG
EYLVVGGSCREARVYTRDGICVGPVSQQASWVWCCQARPDASHLALGCQDGTIAYFELGF
STVHSLYRERYAYRDNMTDVIIQHLVTDEKVRIKCRDLVKKLAIYKHRLAVQLPERIMVY
ELSSESSEPNDMHYRLRDKIVRKVECTLLVVCSEHLVLCQERRLQCLRLRGGACEREWVL
SSAIRYIRALGGPVGREGLLVGLRDGQVLQLLLDNPFPLFLIKVTSPVRCLDLSADRTRL
AVVDEKGTCLVYQLDSRQLLFQEPNANSVAWNTENAELLCFTGGGALAVKAGEFPVLRQK
LEGFVVGFGGCKLFCLQHNSVSTVEVPLSPCLYQYIEKNRFREALTIACLGVPEEDWRYL
AKEALEALDLVVAKRAAVRLGDPALLRLVRSLQDQEARGEKRESLLGDVMAQQGRFSEAA
RLYKKAGRNSKAVDMYTDLRMFEVAQILSRLTANTSLELRSGRRLHPLRSVMSQDEQPSS
AATPMLAPAATPSWMVTSPQKDPPMFAGLRGEDVEDWLEEYDRIFANPSVRSDIAKKRLA
GRVQHTGESYTSYIEDVLALCRRVDTFMAENDRAFAAVGQNAELRAKICGDYANWLAEHD
RFVDAQKAFYEAGRQDEALKVLERLTQYAVDECRFRDAGYFYWLLSRQILECASKEGDAA
SKEALISRSTKLQDLADVYYIYHNIHRYIEEPFTAYLPEALFNMSRYLFHQLMDQSIRGV
SLVGVLYALSKQSRNLGAHRLARHCYEQLQNLHVPLRFRDTLDLAALTVRSKPFSDAQDL
LPLCYRCSSTNPLINQRGRCCVNCSQPFVHSFIAFEVLPLVEFTLAEGISDSEAFEILEG
KARVTKEPKKDKPGSPSRQIINGFETLQINHGDAADEDPFAFQLSNLEEPGEGVGGVSVI
LDREALATLGPRDVVVCRQPEPLRCRFYRNVVPDVVVVSCPSCAKVFTGDDFEMHTLQTN
ACPFCRTKLEDAGA
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgtcgcactttgggtggacaaagtacacgaccgcgaaaacaacgagcaatgt
atttacgacctggtcttcaagccagacggcagccagctcatagtcgcagccggcacgcga
gtcctggtgtatgacacgtcggacggcgcactcgttcagccactgaaaggccacaaggat
gccgtgtactgcgtctcctacgccagagacggcaaacgtttcgcatcgggaggtgccgac
aagcaggtcatcatctggacggcgagcttggagggcattctcaagtattcacaccatgat
tccattcagtgcctcacttataacccactcacccacactcttgtcagctgttcttgctca
gactttgggctgtggtcttcggaacaaaagtctgtctccaagcaccgcaccagcgggaga
gttaccagcgcgggctggaaccccgacggtcagttcttggcactcggactcgctactggc
accgtcagcattcgtggcagatctggtgaagaagtcgtacgcattgacagacccggtgga
ccgaaggcggccgtgtggggagtctgctggaaccctgtgaaggaagaaggcgtcggagac
gtccttgccgtagccgactgggcacagactctcagcttctacaatgtggcgggtcagcag
accggccgcgagcgagcattgggcttcgacccaacattcatcagctacttccccggcggc
gagtaccttgtggttggcggctcgtgccgcgaggcacgcgtctacactcgagacggcatc
tgcgtcgggccggtctcccagcaagcctcgtgggtgtggtgctgtcaggcacgcccagat
gccagccacttggccctgggctgtcaggatggcacgattgcctattttgagctgggcttc
tccacagtgcacagcttgtaccgcgaacggtacgcatacagagacaacatgacggacgtc
atcatccagcacctcgtgaccgatgagaaagtgcgaatcaagtgccgtgacctggtcaag
aaactggcgatctacaaacaccgccttgctgtccagctgcccgaacgaatcatggtgtat
gagctgagtagtgagtcgtctgagcctaacgacatgcactacaggctgcgagacaagatt
gtccgcaaggtggagtgcactctgctggttgtctgctccgaacacctcgttctttgccag
gaacggcggctgcagtgcctgcgccttcgtggcggtgcttgcgaacgggagtgggtcctg
tcgtcggcgatccgctacatccgggccctcggtggtcctgttggccgcgagggcctcctg
gttggcctgcgggacgggcaggtgctgcagctgctgttggacaaccctttcccacttttt
ctcatcaaggtgaccagtcccgtgcgttgccttgacctcagtgcggatcgcacacgcctg
gcagttgtggacgagaaaggcacctgccttgtctaccagctggactccaggcagctgctc
tttcaggaacccaatgccaacagtgtggcatggaacaccgagaacgccgaacttctctgc
ttcacgggtggtggtgcgctggcggtcaaggccggagagttccccgtgctgaggcaaaaa
ctggagggctttgtggttggctttggaggctgcaagctcttttgcctccagcacaacagt
gtcagcacagtggaggttcccttgtcaccatgcctgtatcagtacattgagaaaaaccgc
ttcagggaggccctcaccattgcctgcttgggcgtgcccgaggaagactggcggtacctg
gccaaggaggcattggaggccctcgacctcgttgtggccaagagggctgccgtgcggctg
ggggaccccgccctgcttcgcttggtgcgctcactccaggaccaagaggcccgtggcgag
aaacgggagtccctgctcggggacgtgatggcccagcagggccggttttccgaggctgcc
cggctgtacaagaaggctggccgcaactccaaggctgtggacatgtacacggatctgcgc
atgtttgaagttgctcaaatcctctcccgcttgaccgcgaatacatccctggagctccgt
tcgggacgccgcttacaccccctgcgttcggtgatgtcgcaagacgagcagcccagctcg
gcagcaaccccaatgcttgcccctgcggccaccccttcttggatggtcaccagccctcag
aaggacccaccgatgttcgctgggcttcgcggcgaggacgttgaagactggctggaggag
tatgaccgcatttttgccaacccatctgtgcgttcagatatcgcgaagaagaggcttgct
gggcgtgttcaacacacgggcgagtcctacacatcttacatcgaagacgtgctcgccctc
tgccgccgcgtcgacaccttcatggcggagaatgaccgtgcatttgcagctgtcgggcag
aatgccgagcttcgtgccaagatttgcggtgactatgcaaactggctcgcggaacacgat
cgttttgttgacgcccagaaagctttctacgaagctggccgtcaggacgaggcactgaag
gtgctggaacgcctcacccagtatgccgttgatgagtgcagatttcgcgatgctggctac
ttctactggctactctctaggcagatcctagagtgtgcgagcaaagagggtgatgctgca
agtaaagaagcactgataagccgctcgaccaagcttcaggatctggccgatgtctactac
atttaccacaacattcaccgttatattgaggagcctttcacggcgtacctgcctgaagcc
ctgttcaacatgtctcgctatctgttccatcagctcatggatcagtcgatacgtggggtt
tcactcgttggcgtgctatacgcactgtcgaagcagagccgtaaccttggtgctcaccga
cttgcccgacactgctacgagcagctacagaacctccacgtgccgctccggttcagggac
actttggaccttgctgcactgacagttagatcaaagcccttcagcgacgcccaagacctg
ttgcctctgtgctaccgctgctcctcgaccaatccactcatcaaccaacgtggccgttgc
tgtgtcaactgcagccagccgttcgtccattccttcattgctttcgaggtgctgcccctg
gtggagttcacactggccgagggcatctcggattcagaagccttcgaaatccttgaaggc
aaggcgagggtgacgaaagaaccaaagaaagacaagccagggtctccgagccgacaaatc
atcaatgggtttgaaacacttcaaataaatcatggtgatgccgcagatgaagaccctttc
gctttccagctctcaaacttggaggaaccaggagagggggtcggtggtgtatcggtgatt
ctggatcgtgaagcactggccacactgggaccccgcgatgtcgtcgtctgccggcagcct
gaacccctgcgctgtcgcttctaccgaaatgttgtgccagacgtcgtggtggtgtcatgt
ccaagttgtgctaaggttttcactggcgatgacttcgagatgcacaccctccaaaccaat
gcctgtccgttctgcaggacaaagcttgaggatgctggtgcctag
DBGET
integrated database retrieval system
