Runella slithyformis: Runsl_0697
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Entry
Runsl_0697 CDS
T01553
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rsi
Runella slithyformis
Pathway
rsi01501
beta-Lactam resistance
rsi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Runsl_0697
01503 Cationic antimicrobial peptide (CAMP) resistance
Runsl_0697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsi03036
]
Runsl_0697
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_0697
01504 Antimicrobial resistance genes [BR:
rsi01504
]
Runsl_0697
Chromosome and associated proteins [BR:
rsi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Runsl_0697
Transporters [BR:
rsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Runsl_0697
Antimicrobial resistance genes [BR:
rsi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Runsl_0697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
Beta-barrel_RND_2
BSH_CzcB
RND-MFP_C
BSH_CusB
HH_MFP_RND
CzcB_C
BSH_Fcp1
Biotin_lipoyl
DUF6139
BSH_YknX
BSH_YhbJ
HH_EMRA
KIF9
HTH_Tnp_Tc3_2
Motif
Other DBs
NCBI-ProteinID:
AEI47139
UniProt:
A0A7U4E4C1
LinkDB
All DBs
Position
complement(830352..831422)
Genome browser
AA seq
356 aa
AA seq
DB search
MNCPKRIPSAYKIPLYTILFCLTFAACKEKKDKPKGGDEKKDRPTIVDVMVAAPQPITNV
IEANGTIIPGEFTELRPEVSGRLTYLNVPEGKSVAQGTVLARINSADLEAQVQRTKVQLE
TATKTEERLKQLLDVNGINQSDYDAALNTVNTLKADVAYTQTLIDKTVVRAPFTGTVGLR
QVSPGAYVTPASILATMQQLGKMKIDFTLPEENSDLIRIGSVVKVKLEGRDTTMRKATVI
ALEPQANRLTRNLMVRAVLDDARVNPGAFAKVIISSGNNKKAILIPTNAIIPDDKNNQVI
IVKEGKATFVNVQTGTRTANNVEITQGISEGDSVVVTGVLFAKPGSTLKVRKAAKR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaattgccctaaaagaattccctctgcctataaaatccccttgtacacaatcctgttt
tgtttgacattcgcagcctgtaaagaaaagaaagacaaaccgaaaggcggtgatgaaaaa
aaggacaggccgaccattgtagatgtaatggtagctgcacctcaacccattaccaatgtc
attgaagccaatggaaccattattcccggggagttcacggaactgcggcccgaagtcagc
gggcggcttacctacttaaatgttccggaaggcaaatcggtggctcaggggacggtattg
gcccgtatcaacagcgcggatctggaagcacaggtacagcgaacgaaagttcagctggaa
accgccactaaaaccgaagagcggctaaaacagcttttggatgtcaacgggatcaatcaa
agcgattacgatgccgctttgaatacggtcaatacgctgaaagcggatgtggcttataca
cagacattaattgataaaaccgtcgttcgtgccccttttaccggtaccgttggattgcgg
caggtgagtccgggagcgtatgtgactcctgccagtatccttgccactatgcagcagtta
ggtaaaatgaaaatcgactttacccttcccgaagaaaacagcgacctgatacggatcgga
agcgtagtaaaggtaaaactggaaggcagggatactacgatgagaaaagccacggtcata
gcgctggagcctcaggccaaccgcctgacccgcaatctgatggtgcgggcagtgctggat
gacgcacgggtcaatccgggggcttttgccaaagtgattatcagtagcggcaataacaaa
aaagccattttgattccgaccaatgccattattcccgacgataaaaacaatcaagtgatt
atagtaaaagaaggcaaggcaacctttgtgaatgtccaaacaggaacacggactgccaat
aatgttgaaatcacgcagggaatcagtgaaggcgactcggtagtagtgaccggagtgtta
tttgccaaacccggttccactcttaaagtacgaaaagcagcaaaacgatga
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