Runella slithyformis: Runsl_2089
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Entry
Runsl_2089 CDS
T01553
Name
(GenBank) Isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rsi
Runella slithyformis
Pathway
rsi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Runsl_2089
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsi01007
]
Runsl_2089
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsi03016
]
Runsl_2089
Enzymes [BR:
rsi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Runsl_2089
Amino acid related enzymes [BR:
rsi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Runsl_2089
Transfer RNA biogenesis [BR:
rsi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Runsl_2089
Prokaryotic type
Other AARSs
Runsl_2089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
AEI48504
UniProt:
A0A7U4E5M5
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All DBs
Position
2399943..2403398
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AA seq
1151 aa
AA seq
DB search
MPMNYKEYKGLDYAQVGKDILEFWKENRIFEKSVEVREGAPSFTFYEGPPSANGTPGIHH
VMARTIKDMFCRYKTLRGYQVKRKGGWDTHGLPIELQVEKELGIRKDDIGIKISIEDYNK
KCREAVMRFTDRWLTMTEKMGYWVDMEDPYVTYKNDYIESLWWLLKQLYEKGLLYKGYTI
QPYSPAAGTGLSSHELNMPGTYKDVKDTTIVAQFKIKLTGKSGYLFDTADSDDIYILAWT
TTPWTLPANSALTVGKDIDYVLITTFNQYTHLPINVILAKDLVGKYFSEKGKDAKLGAYK
EGDKVIPWSIVMEFKGQHLEGIQYEQLLPYVQPLEDADKAFRVILGDFVTTEDGTGVVHT
APTFGADDFRVAKANGVPGIMVRDENGKEVPIVDKQGRFVPEIGEFGGRFVKEQYYSTEE
QEDPEFKPTDVLIAIKLKEENRAFKVEKYEHPYPHCWRTDKPVLYYPMDSWFIRTTALKD
RLVALNNTINWNPESTGTGRFGNWLENLVDWNLSRSRYWGTPLPIWRTEEGEEKCIGSVA
ELTGELEKALASTALTEEQRAKNESFLQSKGTEAFDLHRPYVDEIFLVSDSGKVMTRETD
LIDVWFDSGAMPYAQFHFPFENLDKYPQSMGGTAANESLTSYPADFISEGVDQTRGWFFT
LHAIAGLLFDSVAFKNVVSTGLVLDKNGNKMSKRLGNGIDPFETIDKYGPDAPRWYMITN
AEPWDNLKFNIDGVVEVQRKFFGTLFNTYNFFALYANLDGYKIEQFDRVPKEQLSELDRW
IISKVYSLVKDVTEQFDNYNPTKAGRLIQDFVCDDLSNWYVRLCRRRFWQGEMTTDKRAA
YETLQHCLTAVAQLMSPIAPFFGEWLYRNLTDHVREESIEKNTPFRHESVHFTDWHTYDE
YWVDKDLEVSMQLAQDICSLVHSLRKGNKIKVRQPLSKVLIPVLSEKVRAQIEHVTPIIM
SEVNVKAVEFVSDDSGILKKKIKPNFKALGPKYGPKMKEVAAVINGLSAADISVIEKEGV
LVSGEFSLLRDDVEIIAEDVPGWLVASQGSLTVALDVTVTEELRREGLARDVVNRIQNLR
KDSGFEVTDKIKITVQDNSPELAEAVTSNKDYICQEVQAISLELVTDLNGSATEIEIDEF
LLKVKIEVAGR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgaactacaaagagtataaaggattggactatgcacaggtgggcaaagacatc
ctggagttttggaaagaaaatcgaatcttcgaaaaatcagtagaagtacgggaaggagcg
ccttcgtttacgttttacgaagggccgccttcggccaatggtaccccgggcattcaccac
gttatggcgcgtaccatcaaggatatgttctgtcgttacaaaacgctgcgcggctatcag
gtaaagcgcaaaggcggatgggacacccacggcctgcccattgagttgcaggtagaaaaa
gaattgggcattcgcaaggacgatattggcattaagatcagcattgaagactataataaa
aaatgccgtgaagcagtcatgcggtttactgaccgctggctgaccatgaccgaaaagatg
gggtattgggtcgatatggaagacccgtatgttacctacaaaaatgactacatcgagagc
ctttggtggttgttgaagcaactttacgaaaaaggactgctctataaaggctacacgatt
cagccatattcgccggcagccggcaccggactcagctcgcacgagctgaacatgcccggt
acctacaaagatgtcaaagacacgaccatcgttgcgcagtttaagataaagttgacgggt
aaatcgggctatttgtttgatacggccgacagcgacgatatttatatcctggcctggacc
actacgccctggacactgcccgccaactcggccctgaccgtcgggaaagacattgattat
gtgctcattaccactttcaatcaatacactcacctcccaatcaatgttattttggcgaaa
gatctggtaggaaaatatttttctgaaaaagggaaagacgccaagttgggagcctacaaa
gagggtgataaggtgattccgtggtcgattgtgatggagtttaaagggcagcatctggaa
ggcattcagtacgagcaacttctcccgtatgtgcagccgctggaagatgccgataaagcc
tttcgtgtgattttaggagattttgtgaccactgaagacggtaccggagtggtgcatacc
gctcctaccttcggggccgatgactttagagtggccaaagccaatggcgtaccgggcatc
atggtgcgcgatgaaaatggtaaagaagtgccgatcgtggacaaacaggggcgttttgtg
cccgagatcggtgagtttggcggacgttttgtcaaggagcaatattactcgaccgaagag
caggaagaccctgaatttaagcccacagacgtattgattgccataaagttaaaggaagag
aaccgtgcctttaaagtagaaaagtacgagcacccgtacccgcactgctggcgtaccgac
aagcctgtgctgtattacccaatggacagctggtttatccggaccacggcgctgaaagac
cgtttggtggccttgaacaataccatcaattggaatccggaaagcaccggaacgggacgt
tttggcaactggctcgaaaacctcgtcgattggaacctcagccgcagccgctattgggga
acgccgctgcccatttggcgtacggaagaaggcgaagaaaaatgcattggttctgtagcg
gaactgaccggtgagttggaaaaagctttggcaagtacggcgctgacggaagaacaacgc
gctaaaaacgagtcgttccttcaatcaaaaggaactgaagcctttgatttgcaccgtccg
tacgtagatgagatatttttggtatcggattccggaaaagtaatgacccgtgagaccgac
ctcattgacgtgtggtttgattcaggagcaatgccgtatgcacagtttcactttccgttt
gagaacttggacaaatacccccaaagcatgggcggtacagcggccaatgaatcgcttacc
tcctatccggccgattttatcagtgagggcgtcgatcaaacgcgtggctggttctttacc
cttcatgccatcgcagggcttttgtttgattcggttgcgttcaaaaacgtcgtgtcgacc
ggcttggtgttggacaaaaacggcaacaaaatgtcgaaacgcctcggcaacggcattgac
ccgtttgagaccattgataaatacggtcccgatgcgccgcgctggtacatgatcaccaac
gccgagccgtgggataacctcaagttcaacatcgacggggtggtggaagtgcagcgtaag
tttttcgggacgctgttcaatacctataacttctttgcgctctacgctaatttggacggc
tacaaaattgagcagtttgaccgcgtgcccaaagaacaactctcggaacttgaccgctgg
atcatctctaaagtgtacagtttggtaaaagacgtcaccgagcagtttgacaattataac
cccaccaaagccggtcgtctgattcaggattttgtatgcgacgacctgtccaactggtac
gtgcgcctgtgtcgccggcggttctggcagggtgagatgacgaccgataagcgggcagct
tatgaaacactgcaacactgtctgacggcggtggcgcagctgatgtcgccgatcgctcct
ttctttggagagtggctctatcgcaatctcaccgaccacgttcgcgaagaatccatcgaa
aaaaatacgcctttcaggcacgaatcggtgcattttaccgattggcatacctacgatgag
tactgggtagacaaagacttggaagtgtcgatgcagttggcgcaggatatctgttcgctg
gtacactcattgcgtaaaggcaataagatcaaggtgcgtcagccgttgtcgaaagtgctg
attccggtattgagcgaaaaagtgcgtgcgcagattgagcacgtgacgcccatcatcatg
tcggaagtaaacgtaaaggccgttgagtttgtaagtgatgacagcgggattttaaagaaa
aagatcaaaccgaatttcaaagctttagggccgaagtacggtcctaaaatgaaagaagtg
gcggcggtgatcaacggcctgagcgcagcggatatctcggtgattgaaaaagaaggcgtt
cttgtctcgggcgagttctcactgctcagagacgacgtagagatcattgccgaagatgta
ccgggctggttggtcgcaagtcagggaagccttactgtagcgcttgacgtaaccgttacg
gaagaactgcgccgcgaaggattggcccgtgacgtagttaaccgcattcagaatcttcgc
aaagacagcggctttgaagtaacggataagatcaaaatcacagtacaggataacagccct
gagctggcggaagccgttacgtccaacaaagactacatttgtcaggaagtacaggccata
tcgctggagctggtgaccgacctgaacggctccgcgacggagatagaaatcgacgagttt
ttattgaaggtaaaaatagaagtagccggccggtaa
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