Runella slithyformis: Runsl_3003
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Entry
Runsl_3003 CDS
T01553
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rsi
Runella slithyformis
Pathway
rsi00020
Citrate cycle (TCA cycle)
rsi00785
Lipoic acid metabolism
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
rsi01120
Microbial metabolism in diverse environments
rsi01200
Carbon metabolism
rsi01210
2-Oxocarboxylic acid metabolism
Module
rsi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Runsl_3003
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Runsl_3003
Enzymes [BR:
rsi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Runsl_3003
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
PFOR_II
Thump_like
Motif
Other DBs
NCBI-ProteinID:
AEI49388
UniProt:
A0A7U3ZLG9
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Position
3497152..3499926
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AA seq
924 aa
AA seq
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MEKYSYIANSEAAYIEDLYQKYLQQPDSVDLSWQRFFEGFEFSAKYGENKPKVNGNGAAP
APAETSHSVSHTRKEMEVVHLIRGYRQRGHLMAQTNPLGPRKNRHPELDLKDFNLADADL
DTVFEAGVEVFGRAAKLREIVDALRKVYTEKVGFEYQYIRDRRAKSWLRKKIEQEYLNFN
PTIEQKKRILEKLNDAVTFENFLHTKFLGKKRFSLEGGESTIPALDVVINRGAELGVEEV
VIGMAHRGRLNVLTNILQKPYEQVFNEFEENVELDEFSDGDVKYHMGYESQIETPEGKRV
SLKLMANPSHLEAVNPAVVGYARARADEHYNHVQGQDKYDPILPILIHGDAAVAGQGIVY
EVTQMSNLPAYYTGGTLHFVINNQIGFTTDHEDDRSSIYCSDIARIVDAPIFHVNGNDPE
AVAFVMKVAIEFRQEFNRDVFVDMVCYRKYGHNESDEPRFTQPTMYSKIAKQLNGRDLYL
KVLTERGELDAQIADQMKAELEGELQDLLQKVKQKQLPYKRPKLERDWAELRRSVPEDFE
KSPATGISKEVIDKVGKAISSIPEGFKVLKQIEKVLEERKQIFAGEKPLNWSAGELLAYG
SILAEGKTVRMTGQDVQRGTFSHRHAVLHDAETNANHNSLAYIGEGQGKFEIYNSLLSEY
GVMGFEYGYAMANPHALVIWEAQFGDFVNGAQIMIDQFIAATESKWNAMNGLILLLPHGY
EGQGPEHSSARPERFLILSAEYNMYVCNITTPANYFHMIRRQLALPYRKPAILMSPKSML
RHPMAVSPLSDFAEGTSFQETIGDSFAEPKKVKKVLLCTGKLYWELLDKQQKDNRKDVAI
IRVEQLYPFPKKQVEAYLAQYKKAEILWVQEEPENMGYWSFILREFPEIGLGKVIARKAS
ASPATGYMKIHAKEQAELIEQAFS
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatactcatatatagctaattcagaagctgcgtacattgaggacctgtaccaa
aaatacttgcaacaacccgattctgtcgatttaagttggcaacggttctttgaaggtttt
gaattttctgctaaatacggcgaaaataagcctaaagtaaacggcaacggtgccgccccg
gcacccgctgaaacctcccattccgtttcacatacccgtaaagaaatggaggtggtccac
ttgatcagaggctaccgtcaacgtggacatttgatggcgcagactaacccgctgggcccg
cgcaagaatcgtcatcccgagttggacttaaaagattttaacttagcggatgccgactta
gacacggtgtttgaagcaggagttgaagtatttggccgcgcggcaaaactgcgcgaaatc
gtcgatgcacttcgcaaagtctataccgaaaaggtgggttttgaataccaatacattcgt
gaccgtcgtgcaaaaagttggctgcgcaaaaaaattgagcaggagtatctcaactttaac
cctaccattgagcaaaagaaacgtattcttgaaaagctgaatgatgccgtaacgttcgag
aacttcctgcataccaagtttttgggtaagaaaaggttttcactggaaggcggagagtcg
accattccggcgttggatgtggtcatcaaccgaggagcggaactgggcgtagaagaagta
gtgatcggaatggcccaccgcggtcgtttgaatgtattgaccaatattcttcaaaaaccg
tacgagcaggtatttaacgagtttgaggaaaacgttgaactggatgagttcagtgacggc
gacgtaaaataccatatgggctacgaaagtcagatcgaaacgcccgaaggaaaacgtgtc
agtctcaaattgatggccaatccgtcgcacctggaagccgtgaatccggccgtggttgga
tacgcccgcgctcgtgccgacgaacactacaatcacgtacagggacaggataaatacgat
cccatactgccaatcctgattcacggtgatgccgccgtggcaggacagggaattgtgtat
gaagtaacccagatgtcaaatctgccggcctattacacgggcggtaccctgcattttgtg
atcaacaaccaaatcgggtttaccaccgatcacgaagacgaccgctcttccatctactgt
tcagacattgccagaatcgttgatgcgcctatttttcacgtcaacggcaatgatccggaa
gcggttgcttttgtaatgaaggtagccattgagtttcggcaggagtttaaccgtgatgta
tttgtagatatggtttgctaccgcaaatacggccacaatgagtcggatgagccgcgtttt
acgcaaccgaccatgtactcaaaaatagcgaaacagctcaacggaagagatttatactta
aaagtattgacggagagaggagaattggatgcccagattgccgatcaaatgaaggccgaa
ctggaaggggaattgcaggatttactccaaaaagtaaaacaaaagcaacttccgtacaaa
cgcccgaaactcgaacgtgactgggccgaattgcgccgctctgtgccggaagattttgaa
aaatcaccggcgaccggcatttccaaagaggtgattgataaagtaggaaaagcgatctca
agcataccggaaggcttcaaagtattgaagcagattgaaaaagtactggaggaacgtaag
cagatctttgcgggtgaaaaaccgctgaactggtcggcgggcgaactgttggcctatggt
tctatcctggccgaagggaagacggtccgtatgaccgggcaggacgtgcagcggggaacc
ttctcgcaccgtcatgccgtattgcacgatgctgaaaccaacgccaatcacaacagttta
gcttatatcggtgaaggacagggtaaatttgagatatacaactcattgctttctgagtac
ggggtcatgggttttgaatatggctacgccatggccaacccccacgccttggtcatttgg
gaagctcaattcggtgattttgtcaatggtgcccaaatcatgatcgaccagtttattgcc
gccactgaatcaaagtggaatgccatgaatgggttgatattgctgttgcctcacggatac
gaagggcaggggcctgagcactcaagtgcacgtcccgagcggtttttgattctgtcagca
gagtataatatgtatgtttgtaacattacaacgccggccaactacttccacatgatacgt
cgtcagttggcattgccttacagaaagccggccatactgatgtcaccaaaatcaatgctg
cgtcatccgatggcagtatccccgctgagtgattttgccgaaggaacttcgtttcaggaa
accatcggagattcatttgctgaacctaaaaaggtgaaaaaggtgttgctttgtaccggc
aagctttattgggagttgttggataaacaacaaaaagacaaccgtaaagatgtggccatt
attcgtgtagagcaattgtatccgttccctaaaaaacaggtggaagcctacttggcccaa
tacaaaaaagccgagattctttgggtacaggaagaaccggaaaatatgggctactggtcc
tttattttgcgggagtttcccgaaatcggcttaggaaaagtgattgcccgtaaagccagt
gcttccccggccaccggttatatgaaaatacacgccaaagagcaggccgaactgatcgag
caggctttttcttaa
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