KEGG   Runella slithyformis: Runsl_3436
Entry
Runsl_3436        CDS       T01553                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rsi  Runella slithyformis
Pathway
rsi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Runsl_3436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsi03400]
    Runsl_3436
Enzymes [BR:rsi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Runsl_3436
DNA repair and recombination proteins [BR:rsi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Runsl_3436
 Prokaryotic type
     Runsl_3436
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: AEI49802
UniProt: A0A7U3ZMA8
LinkDB
Position
4013911..4014573
AA seq 220 aa
MKLPFDLTLVLARIEESIRAFPKAAMFELAERGYSTLFEQLISCIISIRTLDETTIPVSL
RLFAAARTPEELLRLTPEQLTELLYGATYPDQKAYTMLGIAKAAVEQYDHRLPADYDSLT
ALKGVGPKCANLALGVATGQAAISVDIHVHRVVNRWGYVQANQPEKTLKQLEAKVPVPQW
IEINRLLMPFGKHICTGTLPRCSTCPVLAWCEQVGVTQHR
NT seq 663 nt   +upstreamnt  +downstreamnt
atgaaattaccgtttgacctaacgctcgtactggcccgcattgaagaatccattcgggct
tttcccaaagcggccatgtttgagcttgccgagcgggggtatagtactttattcgagcaa
cttatttcctgtattatttccattcgtacactcgacgaaaccacgattcccgtctcgctg
cggctttttgccgccgcacgtacgcccgaggaattactgcgtctgacccccgaacaactc
acggagctgctctacggagctacctatcccgaccaaaaagcctacacgatgctgggcatt
gccaaagccgccgtggagcaatacgaccaccggcttccggccgattacgacagccttacc
gcgctcaaaggcgtgggaccgaaatgcgctaatttggcgttgggcgtagcgacggggcag
gcggccatcagcgtggatatacatgtgcatcgggtggtcaatcgttggggctatgtgcag
gccaaccaacccgaaaaaacattgaaacaactcgaagccaaagtgcccgtgccgcagtgg
attgagatcaatcgtctgttgatgccttttggcaaacacatctgcacgggcacgctgccg
cgctgctccacctgtccggtgttggcatggtgcgagcaggtgggcgtgacgcaacatcgt
taa

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