Runella slithyformis: Runsl_5799
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Entry
Runsl_5799 CDS
T01553
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rsi
Runella slithyformis
Pathway
rsi01501
beta-Lactam resistance
rsi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Runsl_5799
01503 Cationic antimicrobial peptide (CAMP) resistance
Runsl_5799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsi03036
]
Runsl_5799
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_5799
01504 Antimicrobial resistance genes [BR:
rsi01504
]
Runsl_5799
Chromosome and associated proteins [BR:
rsi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Runsl_5799
Transporters [BR:
rsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Runsl_5799
Antimicrobial resistance genes [BR:
rsi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Runsl_5799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Efg1
DUF7432
Motif
Other DBs
NCBI-ProteinID:
AEI52207
UniProt:
A0A7U3ZRW2
LinkDB
All DBs
Position
pRUNSL04:complement(30013..31077)
Genome browser
AA seq
354 aa
AA seq
DB search
MKKSSIVITISIVCAFTIFTFLKLSKNKEELSSQVYKADTAKAVLITWEKVDKKMINPSF
IFSGSYEPYKEVQILPERGGKVVADHIELGSFIAKGKLIAALDSDELKLQIADNQTQYDD
ARRTFERNKVLSEGEALTKTAFEKSELALKGLQNRMEVLKKQMTYMNIYAPMSGYITVKN
FELGSIISPGMPIAMLTDISSVNLTILVPENAITQFVKGNSIDVSCDAYPDRPLKGFIDY
IAVKADDSKNFLVKIKVINNTSQLIRGGMFGKAFFKSMQPVGALTVSRNAIVGSTRKPQV
YVIKNNIAVLTDITLGQILEDRLEVVKGLSAGDLVANSGLVNLANGIKVQQTAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtcaagcatcgtcattacgatttcgatagtatgtgcatttaccatttttacc
tttcttaaactcagtaaaaacaaagaagaactgagcagccaagtctataaagcagacacc
gcaaaagcagtgctgattacttgggagaaagtagataaaaagatgataaacccctcgttt
attttctcagggtcttatgagccatataaagaagtacaaatactgcccgaacgaggtggt
aaagtagtagccgaccatattgagctgggcagctttattgccaaaggaaaattgattgca
gccttggatagcgacgagctgaaactccaaatagctgataatcaaacccaatacgatgat
gcacggcggacttttgaacgaaacaaagtattgtcagaaggtgaagctttaacaaaaaca
gcatttgaaaagtcagaattggccctgaaaggcctgcaaaaccgaatggaagtgctcaaa
aaacaaatgacttacatgaatatttatgcgcccatgagtggatatataacggtcaagaat
tttgagttggggtctatcatttcgccgggaatgcccatagccatgcttacggatatttcg
tcggtgaacctaactatccttgtgcctgaaaatgccattacgcagtttgtgaaaggcaac
tcaattgacgtttcttgcgatgcttaccctgacagaccactcaagggattcattgattac
attgcagttaaggcggatgattcaaagaattttttggtgaaaataaaggtgattaacaat
acatcccaacttattcggggagggatgtttggcaaagcctttttcaaaagtatgcagcct
gttggtgctttgactgtgagtcgaaatgcaattgtgggatcaaccaggaagccgcaggta
tatgtgattaaaaacaatattgcagttttgacagacatcactttgggacaaattttagaa
gatcgattagaggtagtcaaaggcttgtcggcaggtgatttggtggcaaatagtggttta
gtcaatcttgccaatggaataaaagtgcagcaaactgctcaataa
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