Cereibacter sphaeroides KD131: RSKD131_0409
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Entry
RSKD131_0409 CDS
T00844
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk00300
Lysine biosynthesis
rsk00550
Peptidoglycan biosynthesis
rsk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSKD131_0409
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSKD131_0409
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsk01011
]
RSKD131_0409
Enzymes [BR:
rsk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RSKD131_0409
Peptidoglycan biosynthesis and degradation proteins [BR:
rsk01011
]
Precursor biosynthesis
Amino acid ligase
RSKD131_0409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ACM00269
LinkDB
All DBs
Position
1:395411..396898
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AA seq
495 aa
AA seq
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MADRAATLSALGLTPAGGRGGDIAVTGLAVDSRQVRPGTLFAALPGSRSHGASFVPAALA
AGATAILTDAAGAALAREALAGSGAALVVAEDPRQTLAGAAALWFGRQPATVVAVTGTNG
KTSVATFTRQIWAALGHAAINIGTTGVEGAFAAPSAHTTPEPITLHRLLAEAAEAGVTHA
AMEASSHGLEQRRLDGVHLAAAGFTNFTQDHLDYHETFEAYFAAKAGLFTRVLPDEGTAV
VNLDDPRGPEIAALARARAQRVIGTGFHADADLRLLSQRFDATGQDLRFSWQGEVHLARL
PLIGGFQAWNVAVAASLAIGAGDAPERVFATFSRLQGVRGRMQLAATRKNGASVFVDYAH
TPDALATALKALRPHVMGRIVVVFGAGGDRDRGKRPLMGRAAADHADVLYVTDDNPRTED
PAAIRRAILEACPEAHEVGDRAEAILRGVDALTPGDALLIAGKGHESGQVVGTDIFPFDD
AEQASIATAALDGLI
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgcgcagcaacactctcggcgctcgggctcacgcccgcaggcggccgcgga
ggcgacatcgccgtgaccggcctcgcggttgacagccggcaagtgcgccccggcaccctc
ttcgcggcgctgcccggctcccgcagccacggcgcgagcttcgtgccggcggcgctcgcc
gcaggcgctaccgcgatcctcaccgatgccgccggcgcggcgctcgcgcgcgaggcgctt
gcgggctcgggcgcggcccttgtcgtggccgaggatccccgccagaccctcgccggcgcg
gccgcgctctggttcggccgccagcccgcgaccgtggtcgcggtgacgggcaccaacggc
aagacatccgtggcgaccttcacccgccagatctgggcggccctcggccatgccgcgatc
aacatcggcacgaccggcgtcgagggcgccttcgcagccccctccgcccatacgacgccc
gagcccatcaccctccaccgtctcctcgccgaggcggccgaggcgggcgtcacccatgcc
gccatggaagcctcctcccacgggctcgagcagcgccgcctcgacggcgtgcatctcgcg
gccgcgggcttcaccaacttcacccaggaccatctcgactatcacgagacgttcgaggcc
tatttcgctgccaaggccgggctcttcacccgggtcctgcccgacgagggcacggcggtc
gtcaatctcgacgatccccgcggccccgagatcgcggccctcgcgcgggcgcgcgcgcaa
cgggtgatcggcacgggctttcacgccgatgcggacctgcgccttctctcgcagcgcttc
gacgcgaccgggcaggacctccgcttctcttggcagggcgaggtgcatctcgcgcgtctg
ccgctgatcggcggcttccaggcctggaacgtcgcggtcgcggccagcctcgccatcggc
gcgggcgacgcccccgagcgggtcttcgccaccttctcccggcttcagggcgtgcgcggg
cggatgcagctcgccgccacccgcaagaacggcgcctcggtcttcgtcgattatgcccat
acgcccgacgccctcgccaccgccctcaaggcgctgcgcccgcatgtgatggggcgcatc
gtcgtcgtcttcggtgccggcggcgaccgcgaccgcggcaagcgcccgctgatgggccgc
gccgcggcagaccatgccgacgtgctctatgtcaccgacgacaatccccgcaccgaggat
cccgccgccatccgccgcgccatcctcgaggcctgccccgaggcgcacgaggtgggcgac
cgggccgaggccatcctgcgcggcgtcgatgcgctcacgccgggcgacgcgctcctcatc
gcgggcaagggccacgaatcgggccaggtggtgggcaccgacatcttccccttcgacgat
gccgaacaggcgagcatcgccaccgccgcgctggacgggctgatatga
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