Ralstonia pseudosolanacearum GMI1000: RSc2002
Help
Entry
RSc2002 CDS
T00071
Symbol
prpD
Name
(GenBank) probable prpd protein
KO
K01720
2-methylcitrate dehydratase [EC:
4.2.1.79
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00640
Propanoate metabolism
rso01100
Metabolic pathways
rso01120
Microbial metabolism in diverse environments
rso01200
Carbon metabolism
Module
rso_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RSc2002 (prpD)
Enzymes [BR:
rso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.79 2-methylcitrate dehydratase
RSc2002 (prpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
ABATE
Motif
Other DBs
NCBI-ProteinID:
CAD15704
UniProt:
Q8XXW1
LinkDB
All DBs
Position
2178619..2180085
Genome browser
AA seq
488 aa
AA seq
DB search
MSAPAANIRPKPDKVIVDIVDYVTRFKVDSKAAYETARHCLIDTLGCGLEALSYPACTKL
LGPIVPGTVVPNGAKVPGTQFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGI
LAVADWLSRTNLAGGKKPLAMRDVLTAMIKAHEIQGCIALENAFNQVGLDHVVLVKVATA
AVVGQLLGLSREALINAVSLAWVDGQALRTYRHAPNTGSRKSWAAGDATSRGVRLALIAR
TGEMGYPSALTAKGWGFYDVSFKGRPFRFQRKYGTYVMENVLFKISFPAEFHAQTAAEAA
MTLHRAIAKAGKTVDDIEQITIRTHAAAIRIIDKQGPLNNPADRDHCIQYMVAVPLIFGR
LTAGDYEDTVARDPRIDALRKKIVCVEDPQFTKDYHDPEKRSIANGITVRFKGKTAPNER
ALKEVVVEYPIGHRRRRKEGMPLLLEKFRTNLARRFPARQQDAILRASLDQKALEAMPVN
EYVDLYVI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccggctgcgaacatccgcccgaaacccgacaaggtcatcgtcgacatcgtc
gactacgtgacccggttcaaggtcgacagcaaggccgcctatgaaacggcgcgccactgc
ctgatcgacaccttgggctgcgggctggaggcgctgtcgtatccggcgtgcaccaagctc
ctggggcccatcgtgccgggaaccgtcgtgccgaacggcgcgaaggtcccgggcacccaa
ttccagctcgatccggtgcaggcggcgttcaacatcggcgccatgatccgctggctggat
ttcaacgacacgtggctggccgccgaatggggccatccgtcggacaacctcggcggcatc
ctggccgtcgcggactggctgtcccgcacgaacctcgccggcggcaagaagccgctcgcc
atgagggacgtgctgaccgcgatgatcaaggcccacgagatccagggctgcatcgcgctc
gaaaacgcattcaaccaggtggggctggaccacgtcgtgctggtcaaggtcgccaccgcc
gcggtggtcgggcaactgctcgggctgtcgcgcgaggcgctcatcaacgccgtgtcgctg
gcgtgggtcgatggccaggcgctgcgcacctaccgccatgccccgaacacgggtagccgc
aagtcctgggcggcgggcgacgccaccagccgcggcgtgcgcctggcgctgatcgccagg
accggcgagatgggctatccctccgccctcaccgccaagggctggggcttctatgacgtg
tccttcaagggccggccgttcaggttccagcgcaagtacggcacgtacgtgatggaaaac
gtgctgttcaagatcagcttcccggccgagttccatgcgcagaccgccgccgaagcggcc
atgacactgcacagggccattgccaaggccggcaagaccgtcgatgacatcgagcagatc
acaatccgcacgcacgcagcggcaatccgcatcatcgacaagcaaggcccgctgaacaat
ccggcggaccgcgaccattgcatccagtacatggtcgccgtgccgctcatcttcggccgc
ctgaccgccggggattacgaagacaccgtcgcccgcgacccgcgcatcgatgcgctgcgc
aagaagatcgtctgcgtggaagacccgcagttcaccaaggattaccacgacccggagaag
cgttcgatcgccaatgggatcaccgtccggttcaagggcaagacggcgcccaacgaaagg
gcgctcaaggaggtcgtggtggagtacccgatcggccacaggcggcggcgcaaggaaggc
atgccgctgctgctcgagaagttcaggaccaacctggcccgccgctttccggccaggcag
caggacgccatcctgcgcgcttcgctggaccagaaagcactcgaggccatgccggtcaac
gagtatgtcgatttgtacgtgatttga
DBGET
integrated database retrieval system
