KEGG   Ralstonia pseudosolanacearum GMI1000: RSp0058
Entry
RSp0058           CDS       T00071                                 
Symbol
stcD
Name
(GenBank) probable stachydrine utilization oxidoreductase protein
  KO
K21833  N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
Organism
rso  Ralstonia pseudosolanacearum GMI1000
Pathway
rso00260  Glycine, serine and threonine metabolism
rso01100  Metabolic pathways
Module
rso_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:rso00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RSp0058 (stcD)
Enzymes [BR:rso01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.7  With an iron-sulfur protein as acceptor
    1.5.7.3  N,N-dimethylglycine/sarcosine dehydrogenase (ferredoxin)
     RSp0058 (stcD)
SSDB
Motif
Pfam: Oxidored_FMN Pyr_redox_2 NAD_binding_8 HI0933_like FAD_oxidored FAD_binding_2 Pyr_redox DAO AlaDh_PNT_C GIDA Thi4 FAD_binding_3 Pyr_redox_3 3HCDH_N NAD_binding_7 Amino_oxidase TrkA_N
Other DBs
NCBI-ProteinID: CAD17209
UniProt: Q8XTP8
LinkDB
Position
megaplasmid:65014..67077
AA seq 687 aa
MRYPHLFKPLQLNQLTLRNRIVSTAHAEVYAEPDGLPGERYIRYYEEKAKGGVGLAVCGG
SSPVSIDSPQGWWKSVNLATDRIIDPLARLAETMHRHGAKIMIQATHMGRRSAFHGEHWP
HLMSPSGVREPVHRGNAKIIEVEEIQRIITDFAAAAKRVKAAGMDGIEISAAHQHLIDQF
WSPRTNHRTDEWGGSLENRLRFGVEVLKAVREAVGKDFCVGLRMCGDEFHEDGLDHEQLK
EIAQAMSETGLIDYLGVIGSGADTHNTLANCMPPMALPPEPFVHLAAGIKSVVKVPIMHA
QSIRDAGQAERLLASGMIDLVGMTRAQMADPHMVIKIRDGREDEIKQCVGANYCIDRQYN
GLDVLCIQNAATSREETMPHVIEKSRGPKRKVVVVGAGPAGLEAARVARSRGHDVVLFEK
NHEVGGQIMLAAKAPQREQMSGIVRWFDMETKRLGVDRRLGVEVDTKAIMAEKPDIIVLA
TGGRAFSDQVPDWGVADGLAVSSWDILSGKVEPKQNVLVYDGVSTHAGAGVADFIASRGS
KVEIVTPDVKVADDCGGTTFPIFYRRLYAQGVIHTPNYWLDRVYEEDGKKIAVIRNEYTE
ELEERAIDQVVIENGITPNDALYWKLKPESVNRGQIDVHKLFAAEPQPWLSEELGNGRFL
LFRVGDCISMHNIHGAIYDALRLVKDF
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgcgttatccccacctgtttaaacccctgcagctcaaccagttgacgttgcgcaatcgg
atcgtcagcaccgcgcacgcagaggtgtatgcggagccggacggcctgccgggcgagcgc
tacatccgctattacgaggaaaaggcgaagggcggtgttggcctggccgtgtgcggtggg
tcgagccccgtgtcgatcgacagcccgcaaggctggtggaagtctgtgaatctggcaacg
gacaggatcattgacccactcgcgcggctggccgaaacgatgcaccggcacggcgcgaag
atcatgattcaggcgacgcacatgggccgccgctcggcgttccatggtgagcactggccg
cacctgatgtcgccgtcgggcgtgcgcgagcccgtgcaccgcggcaacgcgaagatcatc
gaggtggaagagatccagcgcatcatcaccgacttcgcggcagcggcgaagcgtgtgaag
gcggcaggcatggacggcatcgagatctccgccgcgcaccaacacctgatcgaccagttc
tggagcccgcgcaccaatcaccgtacggacgaatggggcggcagcctcgaaaatcgcctg
cgttttggcgttgaagtgctgaaggcggtgcgcgaagcggttggcaaggatttctgcgtt
ggcctgcggatgtgcggcgacgaattccacgaagacggcctcgatcacgaacaactgaag
gaaatcgcgcaggccatgtctgagaccggcctgatcgactatctcggcgtgatcggctca
ggtgccgacacgcacaacacgctcgcgaactgcatgccgccgatggcgctgccgccggag
ccgttcgtgcatcttgcggcgggcatcaagtcggtcgtgaaggtgcccatcatgcatgcg
cagagcattcgcgatgcgggccaggccgaacggctgcttgcgagcgggatgatcgatctc
gttggcatgacgcgcgcgcagatggccgatccgcatatggtcatcaagattcgcgatggc
cgcgaggacgagatcaagcaatgcgtgggtgcgaactactgtattgaccgccaatacaac
ggcctcgatgtgttgtgcatccagaacgccgcgacctcgcgcgaagagacgatgccgcac
gtgatcgagaaatcgcgcggcccgaagcgcaaggtggtcgtggtgggtgcggggcccgct
gggctcgaggcagcgcgcgtcgcgcgatcgcgcgggcacgacgttgtgctgttcgagaag
aaccacgaggtcggcgggcagatcatgctggccgccaaggcgccgcagcgcgaacagatg
tcgggcatcgtgcggtggttcgacatggagacgaaacgcctcggtgtggatcggcggctg
ggggtggaagttgacacgaaggcgatcatggctgagaagccggacatcatcgtgctcgca
accggtggccgggccttctccgaccaggtgccggactggggcgtcgccgacggcctggcc
gtcagttcgtgggacatcctctccggaaaggtcgagccgaagcagaacgtactggtctat
gacggcgtcagcacgcacgccggcgcgggggtcgcagacttcatcgccagccgcggctcc
aaggtcgagatcgtcacgcctgacgtgaaggtcgccgacgactgcggtggcacgacgttc
ccgatcttctaccggcgcctgtatgcgcaaggggtcatccacacgcccaactactggctt
gaccgcgtgtacgaggaagacggcaagaagatcgcagtgattcgcaacgagtacaccgag
gagctggaggagcgtgccatcgatcaggtcgtgatcgaaaacggcatcacgcccaacgac
gcgctgtactggaagctgaaaccggaatcggtgaaccgcggacagatcgacgtgcacaag
ctgttcgcggccgagccacagccgtggctctcggaagagctgggcaacggccggttcctg
ctgttccgcgttggtgactgcatttcgatgcacaacatccacggcgcgatctacgacgcg
ctgcgcctcgtgaaggatttctga

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