Rhizobium sophoriradicis: N2597_13340
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Entry
N2597_13340 CDS
T11817
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rsop Rhizobium sophoriradicis
Pathway
rsop00540
Lipopolysaccharide biosynthesis
rsop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
N2597_13340 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rsop01005
]
N2597_13340 (lpxC)
Enzymes [BR:
rsop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
N2597_13340 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rsop01005
]
Lipid A
N2597_13340 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
RebB
Motif
Other DBs
NCBI-ProteinID:
UWU33148
LinkDB
All DBs
Position
complement(2674540..2675496)
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AA seq
318 aa
AA seq
DB search
MAIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVVFQRLHDNGDITELKAVS
SQVGNTDLCTVLGFSPTHSVATIEHVMAAIYALGLDNVVIEVQGAEMPIMDGSSLPFVEA
IEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTRFEVEIDFDCPLIGRQKWAGD
MSAAVFKTELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
FVRHKTLDAVGDLSLAGVQFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRV
AARELIAVSAAEFAPWSA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaattggcttgctgggttttcaaacgacggtatcgcgtcccgtgacgctctcgggc
attggggtccattcgggtgctaatgtctcgatcacgctgaacccggccgaatcggacacc
ggcgtcgttttccagcgcctgcacgacaatggcgacatcaccgaactgaaggccgtctct
tcgcaggtcggcaataccgacctctgcaccgtgctcggcttttcaccgacgcattcggtt
gcgacgatcgaacatgtcatggccgccatctatgcgctcggcctcgacaatgtggtgatc
gaagtgcagggcgccgaaatgccgatcatggacggcagttcgctgccttttgtcgaggcg
atcgagcaggtcggtctcgtctcgctcggcgtcaagcgccgctatatccgcatcaccaag
ccggtgcgaattgagcatggcggttcctggagcgaattccgtccctatgacggcacacgc
ttcgaagtggaaatcgatttcgactgcccgctgatcggccggcagaaatgggccggcgac
atgagcgccgcggtcttcaagaccgagctttcccgcgcccgcaccttcggcttcatgcgc
gatgtcgagcggctctgggcttcgggccatgcgctcggctcgtcgctcgaaaattccgtc
gtcatctcggatgacaacaccgtcatcaacgtcgaagggctgcgttacgccaaggacgag
ttcgtccgtcacaagacgctcgatgccgttggcgacctgtcgctcgctggcgtccagttt
atcggttgctaccgctcctaccgtggcggccacaagatgaacgccaatgcgctgaaggcg
ctgctcgccgatccctccgcttacgaagtggtcgagacctcgacgccgcgccagcgcgtc
gctgctcgggaattgattgccgtcagcgctgcggaattcgctccctggtcggcatga
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