Roseivirga spongicola: T7867_03210
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Entry
T7867_03210 CDS
T09626
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rsr
Roseivirga spongicola
Pathway
rsr01501
beta-Lactam resistance
rsr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T7867_03210
01503 Cationic antimicrobial peptide (CAMP) resistance
T7867_03210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsr02000
]
T7867_03210
01504 Antimicrobial resistance genes [BR:
rsr01504
]
T7867_03210
Transporters [BR:
rsr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
T7867_03210
Antimicrobial resistance genes [BR:
rsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
T7867_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WPZ11106
LinkDB
All DBs
Position
complement(714661..717732)
Genome browser
AA seq
1023 aa
AA seq
DB search
MASLSTISIKRPVLALVMNIVIVIFGIIGFLYLGVREFPSVDPPVISVSTSYTGANAEII
ESQITEPLEEALNSIAGIKTLTSTSRDGGSSISAEFDLGVDLEAAANDVRDKVAGVVRRL
PPDVEPPNVSKADADSSPIIFLNISSSERDLLELTLIAENIFKERVQTIQGVSSVQVWGS
KRYSMRLKMDPEKLAAYELTPIDVLNAVNSDNVELPSGRVEGAETELTVRTVGRINTPQE
YNDLIVKEEGDIIVRFRDIGEAVLAPENERTILKRDGVPMVGIAVITQPGSNNIEIADAF
YERIEQVKKDLPADINVAIGFDNTDYIRESITEVQQTIIVAFALVVVIIFLFLRDWRTTV
IPIATIPISLIGAFFIMYVSGFSINVLTLLGIVLAIGLVVDDTIVVLENIYSKIEGGLHP
EEAGVKGANEIFFAVISTTVALVAVFMPVIFLQGLTGRLFREFGIVVAGAVVISSFVALT
LTPMMSTRILKKREKHNAFYNFTEPFFVWLNNVYAKSLDSFMKVRWMAFVVILLAGGMIA
FFLTGNRIPEEIAPLEDRSSVRGFATGPEGATFEYMDRYVDSLITAVDKEVPETQAIITV
TSPGFGNSAVNSARFFLILKDPDQRKRTQQQIVDDFTPAVNRYTEARAFLSQPATIGGRR
SSGFPVQYVIQAPNIEKLKEVLPEFMLRAQDSPEFTFVNLDLKFNKPEIKIEIDREKARS
LGLSVRDIAQTLQLGLSGQRFGFFILDGKQYQIIGQVDRENRNDPLDLKTLYVRNNQGEL
IQLDNLVTLTESSSPPQLYRFNRFASATVSANLAPKVTTGQGIEAMDRIADEVLDETFQT
DLAGESREFKESTNSLYFAFGFALVLIYLVLSAQFESFVDPLIILFTVPLALAGALLVLW
RYEETLNVFSQIGIIMLVGLVSKNGILIVEFANQRKAQGLSVMEAIVDSSRSRFRPILMT
SFSTILGILPIALALGAGAESRVSMGVAIIGGLVFSTILTLYVIPAMYSYFTSKKSRLAR
TSA
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggccagtttatcaaccattagtattaaaagaccagtgcttgcactggtaatgaatatt
gtcatagtcatattcggaatcattggcttcttgtatctgggagttagggaatttccgagt
gtagacccacctgtaatctctgtttcaacctcttacactggagctaatgcagagattatt
gaatctcagattaccgaacctttagaagaggcccttaacagtattgcaggtattaaaacc
ctgacttctactagtagagatggtggtagctcaattagtgcagagttcgatttaggtgta
gaccttgaggccgctgccaatgatgttagagacaaagtagccggagtagttagaagactg
cctcctgacgtagagccaccaaacgtatctaaagccgatgcagattcgagccctattatt
ttcctcaatatttcgagtagtgagagagaccttctggagctaacgcttatagctgaaaac
atcttcaaggaaagagttcagactatccaaggagtgagttcggtacaggtctggggctct
aaaaggtattccatgaggcttaaaatggatccagagaaattggctgcctatgagcttacc
ccaatagatgtattgaatgcggttaatagtgataatgttgaactgccttcaggaagagtg
gaaggtgctgaaaccgaacttactgtaagaacagttggccgaatcaacactcctcaagaa
tataacgacctgattgtaaaagaagagggcgatattattgttcgctttagagatattgga
gaggcagttctggcaccggaaaatgaaagaactattctgaagagagacggagtgcctatg
gtgggtattgctgttatcactcagccaggatctaacaatattgaaattgccgatgccttt
tatgaaagaattgagcaagtaaagaaagacttacctgcagatattaatgttgctataggc
ttcgataatacagattatatcagagagtctatcacagaagtgcaacagaccattatagtt
gcctttgcgctcgtagtagtaatcattttcttgtttctaagagactggagaaccactgta
attcctattgctactattccaatttcactaattggagcattttttattatgtacgtttct
ggcttttccataaacgtacttaccctgctcggaatagtgttagccattggtcttgtagta
gacgataccattgtagtgctagaaaatatctactctaaaattgagggtggtttacaccca
gaagaggctggcgttaaaggagcaaatgaaattttctttgcggtaatatctactacggta
gccttggtggcagtatttatgccagttattttccttcaaggtttaacgggaaggctattc
cgtgaatttggtattgtagtggctggggcggttgtaatatcgtcttttgtagcgcttacc
cttactcctatgatgagtacacggatattaaagaagcgcgaaaagcacaacgcattttat
aattttacagagcccttctttgtttggttgaataatgtgtatgccaagtctttagactca
tttatgaaagtgaggtggatggcttttgtggttattctattggcaggaggaatgattgcg
tttttcttaacgggtaaccgaattcctgaagaaattgctccattagaagatagatccagt
gttcgtggttttgcaacagggccagaaggagccacttttgagtacatggacagatatgtg
gatagccttatcactgctgtagataaagaagtgccagagacacaggccattattacggtt
acttctcctggttttggtaatagtgcagtcaattctgctagatttttcctgattcttaaa
gacccagaccaaagaaagagaactcaacaacaaattgtagatgactttacaccggcagtg
aatcgatacaccgaggcgagagcattcttgtctcagcccgcaactattggaggaagaaga
agttctggcttccccgtacagtatgtaattcaggcgcctaacattgaaaagctgaaggaa
gttttacctgagtttatgctcagagcacaggactctcctgaatttacatttgttaatcta
gatcttaagttcaataagccagagattaagattgaaattgatagggagaaggctaggtct
ttaggactatcggttagagacattgcccaaaccttacagctaggcttgtcgggtcaacgt
tttggctttttcattttagatggaaagcaataccaaattatcggtcaggtagatagagag
aatagaaacgatccattagatctgaaaacgctttatgtaagaaacaatcagggcgaacta
attcagctagataatttggtaacccttactgaaagcagctctccaccgcaactctaccga
ttcaatagatttgcttcagctacggtttcggccaacttggctccaaaagttactactggt
caaggaattgaagcaatggatagaattgctgatgaagtactagacgaaacctttcagaca
gacttagcgggcgaatctagagaatttaaagaaagtactaacagtctttactttgcgttc
ggttttgctttggtgcttatctacttagtactatcggctcagttcgaaagctttgtagat
ccgcttatcattctgtttaccgtaccgttggcacttgcaggtgcattattggtgctttgg
agatatgaagaaactttgaacgtattcagccagatcggaatcattatgctagtaggtttg
gtgtctaaaaacggtatcctcattgtagagtttgccaatcaaagaaaggcacaagggctt
agtgtaatggaagctattgtagattcatctaggtctagattcaggccaattctgatgact
tctttttcaactattctgggaattttacctattgccttagcacttggagcaggtgccgaa
agccgagtatcaatgggggtagccattatcggtggtctagtattctcaactattttaact
ctttatgtcattccggccatgtactcttactttacaagtaagaagagccgtttggccaga
acatcagcttaa
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