Roseivirga spongicola: T7867_03215
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Entry
T7867_03215 CDS
T09626
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rsr
Roseivirga spongicola
Pathway
rsr01501
beta-Lactam resistance
rsr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T7867_03215
01503 Cationic antimicrobial peptide (CAMP) resistance
T7867_03215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsr03036
]
T7867_03215
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsr02000
]
T7867_03215
01504 Antimicrobial resistance genes [BR:
rsr01504
]
T7867_03215
Chromosome and associated proteins [BR:
rsr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
T7867_03215
Transporters [BR:
rsr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
T7867_03215
Antimicrobial resistance genes [BR:
rsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
T7867_03215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
BSH_LcnD
HH_MFP_RND
Biotin_lipoyl
Beta-barrel_RND
RND-MFP_C
BSH_CusB
BSH_YknX
SHOCT
PTS_EIIA_1
CzcB_C
HH_CzcB
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WPZ11107
LinkDB
All DBs
Position
complement(717734..718816)
Genome browser
AA seq
360 aa
AA seq
DB search
MSKFSRIAVILVIIIIVVAWAVYPRLDDFTGSGSNDAIAATASRGPSALPVNVSVVQPKY
IENKIKVTGSILPNESIELKSEVSGLVTKVHFKEGQQVKKGELLISLKDDELKAQLEKLK
YSNQLAKETEGRQKQLLDRGAISQEEYDISLTNLNTTSADIRLLEAQLDKMSIKAPFNGT
LGLRQISEGAYITNGTVITSLYSLNPMKVDFAIPGKYAGNVKVGNRISFGTDASLDTFEG
EVYAIEPKIDETTRTLRLRALADNKSNQLMPGQFAKIELVMESIEDALMVPAVSVIPELN
GHKVYISKGGKAASVPVEIGIRTDEEVQILKGVEPQDSVIISGLLQIRPGSAVQINSVRD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattttctcgaattgccgttatccttgtgataatcattatagtcgttgcttgg
gccgtttacccaagattagacgatttcacaggttctggtagcaatgacgcgattgctgca
acggcttctagaggtccttctgcactgccagtaaatgtaagtgtggttcaacctaaatac
atagaaaacaagattaaagtaactggttcaattctcccaaatgaatctatagagctaaaa
agtgaggtttctggcttagtgactaaggttcattttaaggaaggtcagcaggtgaagaaa
ggagaactccttatttcgctgaaagatgatgaactgaaagcacaactagaaaagcttaag
tatagcaatcagttggctaaagaaactgaaggtaggcagaagcagctgttagatagaggt
gctatcagtcaagaagagtatgatatctctctgaccaaccttaataccaccagtgccgat
ataagattgctggaagctcagctagataagatgtcaatcaaagcaccttttaatggaacg
cttggcttgagacaaattagtgaaggtgcctacattactaacggtactgtaattactagc
ctttatagcttgaaccctatgaaagtagactttgctattccaggtaaatatgctggtaat
gtaaaggtaggtaacagaattagcttcggaacagacgcttctttagatactttcgaaggc
gaagtttacgctattgagccaaagattgatgaaactaccagaacgcttagactaagagca
ctagctgacaataagtcgaaccagttaatgccaggtcagttcgccaaaatcgaattggtg
atggagagcatagaagacgcgcttatggtgccagccgtttcggttatccctgaattaaac
gggcacaaggtttatatatctaaaggaggaaaggctgcttcggttcctgtagagatagga
attagaacggatgaagaagtgcagatacttaaaggagtggaaccacaagattctgtgatt
atttcgggccttctgcaaataagaccgggttctgcagttcagataaactcagtaagagac
tag
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integrated database retrieval system
