Ruania suaedae: LQF12_06510
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Entry
LQF12_06510 CDS
T08275
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rsua
Ruania suaedae
Pathway
rsua00300
Lysine biosynthesis
rsua00550
Peptidoglycan biosynthesis
rsua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQF12_06510
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQF12_06510
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsua01011
]
LQF12_06510
Enzymes [BR:
rsua01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LQF12_06510
Peptidoglycan biosynthesis and degradation proteins [BR:
rsua01011
]
Precursor biosynthesis
Amino acid ligase
LQF12_06510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Kdo
Motif
Other DBs
NCBI-ProteinID:
UFU04227
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Position
1419549..1421120
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AA seq
523 aa
AA seq
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MNATPAARTTADLAAAFGLDLLEPAGGHPAAGRPVTGVSLDNRLTAAGDLFAALPGARTH
GAEHAPAAVAAGAVAILTDRDGVARLERAGLEVPVLVAADVRGVLGLVSAEILHRPAERM
RTFAVTGTNGKTTTSYLLEEILGALGRTTGLIGTVELKVAGERTPAKLTTPEAPQVQHLL
SRMAGSGVTDLVMEVSSHALALHRVDPIVFDMVGFTNLTPDHLDFHVDMDSYYRAKADLF
TPARARRGVVLAEDRWGRRLAEEATIPVATIGMQTPPARPDPDTDWLISLTHARPDHTEF
TVTHRDGRSVSTQVWMPGRFNVLNAAVAVVMALESGISAADLHHHLRRGLRPTVPGRMEL
VGEQPRCIVDFAHNADALELVLRALRPTTRGRLVVVFGATGERDTAKRPRMGEIAVRHSD
VVVITDDDPHDEDPATIRGEVMAGALRAVGAEQRTGRTIDLFEVAPRSTAIRRAVAAAGP
SDTVLVAGRGHETIQEVAGVEHHLDDREEVRAALAERASRGTS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccactcccgcggcccggacgacggcagacctcgccgccgccttcgggctcgat
ctgctcgagccggccggcggccaccccgccgccggccggcccgtgaccggtgtcagcctc
gacaaccggctgacggcggccggtgacctcttcgccgcccttccgggcgcccgcacccac
ggcgccgagcacgcccccgctgccgtggccgccggcgcggtcgcgatcctgaccgaccgc
gacggcgtcgcacgtctcgaacgggccggtctcgaggtgcccgtcctggtcgccgccgat
gtgcgcggcgtcctcggcctcgtcagtgccgagatccttcatcgtccggcggaacggatg
cgcaccttcgccgtcaccgggaccaacggcaagaccacgacgtcgtacctgctggaggag
atcctcggcgcgctggggcgcaccaccgggctgatcgggaccgtcgagctcaaggtcgcc
ggcgagcgcacaccggcgaaactgaccacaccggaggcaccgcaggtccagcacctgctc
tcccggatggccgggtcgggggtgacggatctggtgatggaggtctcctcccacgcgctg
gcgctgcaccgcgtggacccgatcgtcttcgacatggtcggcttcaccaacctgacgccg
gaccacctcgacttccacgtcgacatggactcctactaccgcgccaaggcggacctcttc
acccctgcgagagcgcggcgaggcgtggtgctggccgaggaccggtggggtcgtcgcctg
gccgaggaggccaccatccccgtggccacgatcgggatgcagacgccaccggcccggccg
gacccggacaccgactggctgatctccctcacccacgcccgcccggaccacaccgagttc
acggtgactcaccgggacgggcggagcgtgtccacccaggtgtggatgcctggacggttc
aacgttctcaacgccgcggtggccgtggtgatggccctcgagtcgggcatctcggccgcc
gacctccaccaccatctgcggcgaggcctgcggcccacggtcccgggtcggatggaactg
gtgggcgagcagccacggtgcatcgtcgacttcgcgcacaatgccgatgcgctcgagctg
gtgctgcgcgcgctgcggccgaccacccgcgggcgcctcgtcgtcgtcttcggggcgacc
ggggagcgggacaccgccaagcgcccgcggatgggtgagatcgcggtgcgccacagcgac
gtggtggtcatcaccgacgacgacccgcacgacgaggatcctgcgacgatccgcggtgag
gtgatggccggcgcgctccgggcggtcggcgccgagcaacgcacgggccgcacgatcgac
ctgttcgaggtcgctccgcgctcgacggcgatccgccgcgccgtggcagcggccgggccg
tccgacaccgtgctggtcgcgggccggggccacgagaccatccaggaggtcgccggggtc
gagcaccacctcgacgaccgggaggaagtgcgcgccgcactcgccgagcgagcctcccgc
gggacctcatga
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