Rhizoctonia solani: RhiXN_00526
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Entry
RhiXN_00526 CDS
T09256
Name
(RefSeq) ABC transporter
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
rsx
Rhizoctonia solani
Pathway
rsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RhiXN_00526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_00526
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
RhiXN_00526
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_15
RsgA_GTPase
AAA_23
SRP54
AAA_28
ATP-synt_ab
Zeta_toxin
MMR_HSR1
Arf
PduV-EutP
NACHT
Motif
Other DBs
NCBI-GeneID:
67022808
NCBI-ProteinID:
XP_043179357
UniProt:
A0A8H8NT89
LinkDB
All DBs
Position
4:join(1627695..1627854,1627904..1628004,1628064..1628158,1628209..1628262,1628321..1628415,1628472..1628552,1628610..1628896)
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AA seq
290 aa
AA seq
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MSGQEENKTTVAIDIKDLTYKHASPFDGIPPALVDLSLSLPKGSRTLLIGANGAGKSTLL
QILAGKRLVKSNDVRIFGRDVFRNSPPGITYLGTEWAMNPVVRSDIVVSHFLDSIGGYRH
KARRDRLLDILDVDLDWHMHAISDGERRRVQLVMGLMGEWDVLLLDEEIDLDVLVRDDLL
KFLKEESETRGATILYATHIFDGLNTFPTYVAHMRFGQFVSEPVLWEQQRIEPELPSPSS
GSTLHALALRWLKDDREFRKQEEVAGRLNRTRGAKPDTGVPTDSEVFYKK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcaagaagaaaataaaaccacagtcgctattgatatcaaggacttgacatac
aagcatgcctctccttttgatggcattcctcctgcactagtcgacctctctttgagtctt
cccaaaggatcgcgaacgctcttgattggcgcaaatggagctgggaaatcgacgttgctt
cagatactcgcgggcaagcgactagtcaagagcaatgacgttcgaatctttggccgagat
gtatttcgcaattcacctccgggaataacttatctcgggactgagtgggctatgaaccca
gttgttcgctctgacatcgtcgtctcccactttctagacagtatcggaggctatagacac
aaagcccgccgggatagattgttggacatattggatgtggatcttgattggcacatgcac
gctatatcggacggcgagcgtcgaagagttcagctggtcatgggcctaatgggagagtgg
gacgtccttctccttgacgaggaaatcgacctcgacgttcttgttcgtgatgatctatta
aagttcctgaaagaagaaagcgaaactaggggagcaacaattttgtatgctacacatata
ttcgatggcctgaacactttcccaacatatgttgcccatatgcgctttggtcaatttgtt
tccgagccagtattatgggaacagcaaagaattgaaccggaattgccttctccttcgtcc
ggctctaccttacatgcattggcattgcgttggctcaaggatgatcgtgaattccgtaag
caggaagaggtggccggtaggctgaacaggactcgtggtgcaaagcctgacaccggagtt
ccaactgactccgaggtgttttataagaagtaa
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