KEGG   Rhizoctonia solani: RhiXN_08033
Entry
RhiXN_08033       CDS       T09256                                 
Name
(RefSeq) ATP-dependent DNA ligase
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    RhiXN_08033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_08033
Enzymes [BR:rsx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     RhiXN_08033
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     RhiXN_08033
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C RNA_ligase BRCT
Other DBs
NCBI-GeneID: 67030312
NCBI-ProteinID: XP_043183234
UniProt: A0A8H8P3L5
LinkDB
Position
9:join(1632464..1632670,1632717..1632835,1632888..1632951,1633525..1633740,1633789..1633848,1633898..1634032,1634090..1634220,1634275..1634360,1634418..1634554,1634613..1634818,1634872..1634967,1635015..1635100,1635154..1635204,1635278..1635378,1635466..1635566,1635621..1635693,1635744..1635904,1635959..1636126,1636175..1636218,1636273..1636362,1636419..1636467,1636518..1636554,1636600..1636684,1636731..1636788,1636842..1636924,1636977..1637082,1637135..1637573,1637624..1637706,1637753..1637836,1637886..1638023,1638074..1638164)
AA seq 1194 aa
MSSMQALPVGIYRISDGRGRWLSESGVGPGTGAGTQLVLLTEEEGTDAGFNARPLTLPGI
LHDLKFFRANAKSGLYASFEGDATENAHLGSHSIPRYYDLVSNGAQGLKVVLKGTKLSLN
TSPCIMYPPMNMDGPPSPPLSAIGGGGVPEPSAVEPLPLLKPAGVFNHGPSPLFSKLTDL
FEALRTERRQEKRKTLLVRWFTNWREKVGTDLHPALRLILPEKDRERAVYGLKESSLAKC
FLASMGIDPKSADGKRVLNWKKPTPDNPTVGDFPTTLYEVLAPRCPNTHGTLTVDRLNEL
LDDLTKCARNIEMQMRVVRKICDACTAAEQRWIVRIILKDLTIQVRETSVLGAFHPDARD
LFNTCSDLKRVAWELWNPSRSLQDDERDVTLWTPFQPMLCKRSKTLAEAVKLVQSHMEDG
MTKGSKNNFVIEEKLDGERMQLHKRGNAYFYSSRKGTDYTYLYGAHVGTGSLTPYIHAAF
DDRIEDCILDGEMMVWDPMLDKYLAFGTLKTAATDILGKIDTWDNESPRPCFKVFDILLL
RNPSRPAPKNFSNTPLSVRRKVLAQVFKPIQGRLELAAQSFGSNAKDVESALEKIVEERG
EGLVLKAPESPYVLAGREAFWVKVKPEYMDSMSDSVDLLVVAGKWGSGSRGGKVSSLVCA
VRDDYSRSGVSETGMNVYATFVRVGTGLTVEDYDWVNKKKWIRMDKKSPPPHMKVSPSVS
SDDKGDVYLDPEDWFIISIKGASITTTDEFGTNLTMRFPRCKAIRRDLSVDDCLTWSGLR
ELHGGKRKDSDDRQEGPKRRKIGGRKPTTLSLSHQATDVKEIEITSDLFEDMRFLVVPDL
TGNSIVSKAVIEKLIYQHGGDFTQVMQGDSTLTVIYGGTKLIPQVKRIMKRNDMDILKPQ
WLTDSIEKGRLVPLQAKYYFYATKEAQEDGAYKMNNEEVEVMSSLRSAKISSAQSPPDLD
HTLSSSPEPEEISEYLKPIPLDENITKIPDDPSASDTQSEPEDLADQLSDEEWTEIAATH
TGDNHNKIDSMESGIEMFKEGSTEQKPVAVKAQALINSGEDIESNTVISAMRSEISSTTS
KLDQNLFFRNLCFYLDSPDNARDEDFLVSNTHESKIRLSMDRARKDILVHGGALALGLSD
PRLTHIVLHELDKSRRIELIRRTSKPKRRYVVLTSFISACVSEGTLLDEDAFMP
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgtcctccatgcaagctctacctgtaggtatatatcgtatctccgacggccggggtcgg
tggctatccgaatccggggttggtcccggtacgggcgctggcactcagctagttctgctc
accgaggaagaaggtacagacgcagggttcaatgcacgtccacttactctgcctggtatt
ttgcatgatctaaagttttttcgtgcaaacgccaagagtggtttgtatgcgtccttcgag
ggggatgcgacggaaaacgctcacctcggctcccattcgattccgcgatattatgatctg
gtatctaatggagcacaaggactcaaagtagtgctcaagggaacgaagctaagtctgaat
acttctccttgcataatgtatccacctatgaatatggacggacccccttcgcctccactt
tctgcaattgggggcggtggtgttcccgagcccagtgcggttgagcctctgccactactg
aaaccagctggggttttcaatcacggaccgagcccgctgttttccaagctcactgatcta
ttcgaggcgctgagaacagaaagaaggcaagaaaagaggaaaaccctgttggtgaggtgg
tttacgaattggagagaaaaagtcgggaccgatctgcatcctgcgcttcgcttaattttg
cccgagaaagatagggagcgcgcagtgtatggtctaaaagaatcttcacttgccaaatgc
tttctagcttccatgggtatagacccaaagtctgcggatggcaagcgggtgctaaattgg
aagaagcctacccccgacaatccgaccgtcggagactttccgacgacattatacgaagtc
ttggctccccgctgtcccaatacccatgggacactcactgtcgaccgtctaaacgaatta
ttagatgatcttaccaaatgtgcgagaaatattgaaatgcagatgcgggtagttcgcaaa
atttgcgatgcatgtactgcagcggagcaaagatggatcgttagaattatcctcaaagat
cttacgatccaagttagagaaaccagtgtgctcggtgccttccatccagatgcaagggat
ttattcaacacctgcagtgatcttaaacgtgttgcatgggagctttggaacccttcgagg
tccttgcaagacgacgagcgcgatgttaccctctggaccccctttcaaccaatgctttgc
aaacgtagtaagacccttgctgaagccgtaaagctggttcaaagtcatatggaggacggg
atgaccaagggctcgaagaacaatttcgttatagaagaaaaacttgatggggaacgcatg
caattacacaagcgcggtaatgcttacttttactcctctcgtaaaggaaccgactacacc
tacctttacggagcccacgtaggcacgggcagcctgacgccttatatccatgcagccttt
gatgaccggatcgaagactgtatattggatggagagatgatggtatgggatccgatgctg
gacaagtatcttgcttttgggacactcaagacagctgctaccgatatcctaggaaagata
gatacctgggataatgagagtcctagaccttgctttaaagtttttgatattctacttttg
cgaaatccttcacgtcctgcacccaaaaacttttccaatacacccttgtcggtacggagg
aaagtactcgcgcaggtgtttaaacctatccaaggacgactagagctggcagcgcaatcg
tttggtagtaacgcgaaagacgtagagagtgcactggaaaaaattgtggaagagcgggga
gaggggttagttttgaaggcgccggagtcaccctacgtactcgctggaagagaggcgttt
tgggtcaaggtaaaacctgagtatatggactccatgtccgactcggttgatctcctcgtt
gttgcagggaaatggggatcaggtagccgcggagggaaagtatcgtcacttgtctgtgca
gtacgggacgactattccagatcaggagtaagcgaaactggaatgaacgtatatgcgacc
tttgtgcgcgtcggtacggggctgaccgtcgaagactatgactgggtcaacaaaaagaaa
tggattcgcatggacaagaaatcaccgccccctcatatgaaggtttcgccctctgtttcg
agtgacgataaaggcgatgtttatttggatcccgaagattggttcattataagcatcaag
ggtgcatcaatcactacaaccgacgaatttgggactaatctcactatgcggttccctaga
tgtaaggcaatacggcgagacctatctgtggatgactgtctgacttggagcgggttgaga
gagttgcatggcggaaaacgcaaagatagtgatgacagacaagaaggcccgaagagacgt
aaaattggtggtagaaaacctactacactttccttgtcacaccaagcgactgacgtcaag
gagattgaaattacatccgatttatttgaagatatgcggtttttagttgtccctgacctt
actggcaacagtattgtctcaaaggccgtaatcgagaaacttatataccaacatggagga
gacttcacgcaagtgatgcagggcgacagtacattgactgtaatttatggcggaacaaaa
ctaatccctcaagtaaagcgtattatgaaacggaatgacatggatatcctgaaaccccag
tggcttacagactcgattgaaaaagggcgtctcgtcccactccaagcaaaatattacttc
tacgctaccaaggaagcgcaggaagatggggcatacaaaatgaataatgaagaggtagaa
gttatgtcatctctgagaagtgcaaagatcagttcggcacaatcaccgccagatctggac
cacacactctcgtcgtccccggagccagaagaaatttccgagtatctgaaacctattcct
ttggacgaaaatattacgaagataccggatgatcccagtgccagcgacacacagtcagaa
cccgaagatctggctgatcaactgagcgatgaagagtggactgaaatagctgctactcac
actggtgataatcataataagatcgactccatggagtctggcatagaaatgtttaaggaa
gggagtacagagcaaaagcctgtggctgtgaaggcacaggcactgattaattccggagaa
gatatcgagtctaacactgttatctcggctatgagaagcgaaattagctccactaccagc
aagctcgatcaaaatctgtttttcagaaatctatgcttttatctggactctcctgacaat
gcacgagatgaagactttctcgtctctaacactcatgaaagcaagatcagattgagtatg
gatcgcgcccgtaaagatatcctcgtccacggcggagcacttgctctagggctttctgac
cctcgattgacccatattgtgcttcacgaacttgacaaatcacgtcgcatagagttaatt
cgtaggacttccaaaccaaagcgtcgatacgtggtccttaccagttttattagcgcctgt
gtctcggagggaacgctgctggacgaagacgcgtttatgccataa

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