Raphanus sativus (radish): 108807593
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Entry
108807593 CDS
T06014
Name
(RefSeq) uncharacterized protein At4g19900-like
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108807593
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108807593
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108807593
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
108807593
Glycosyltransferases [BR:
rsz01003
]
Glycan extension
P blood group
108807593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
108807593
NCBI-ProteinID:
XP_018435365
UniProt:
A0A6J0JIA9
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All DBs
Position
6:3976282..3977567
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AA seq
402 aa
AA seq
DB search
MISKKLAMLVVLALLHLLYMKAPTSTLSYDDKPPFKQNVPLLPRTTGSMSTTTSSSSVVS
DHQEKEESDPLVPPPKATKSERISWFRRKLPELEILKSTTKSKRFHRRVLDLYNKNCSAQ
FFMVWLSPAKSFGPREMLAVDTLFTTNPGACLVILSNSLDSPKGHTILKPLLDQGFNLAA
VTPDIPFLVKNTPAEAWLKKLKSGKMDPGSIPLFMNLSDLTRLAVLYKYGGIYLDTDIIF
LNSMTGLRNAIGAQSLHPKTKTWTRLNNAVMVFDLHHPLMREFLHEYSTTFDGNRWGYNS
PYLVSRVISRLGHKPEYNLTIFPPDAFYPVNWLKIPSLFKKPATTREAKWVEKTVQEMNK
GSYMIHLWNKVTRKMKIEEGSVMHRLISTHCTVCGNITESHS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaagaagttagctatgttggtggtcttagctttattgcatctcctctacatg
aaagctccaacatctactctctcttatgacgataaaccaccgttcaaacaaaacgtgcct
cttcttcctagaaccactggttccatgagtactactactagtagtagcagtgtggtctct
gatcaccaagaaaaagaggagtcagatccgttggtacctcctcctaaagctaccaagagc
gagagaatcagctggttcaggagaaagctacccgagttggagatactcaagtcaacaacc
aagagcaagagattccatagaagagtattggatctgtacaacaagaactgctcagctcag
ttctttatggtttggctatctcctgccaagtcctttggaccgagagagatgttagctgtt
gacaccctcttcaccaccaaccctggtgcttgcttggtgattttgtccaactccttagac
tcacccaaaggacacaccatccttaaacccttgcttgaccaaggcttcaacctcgctgcc
gtgacaccagacatcccgttcctcgtcaagaacactccagcagaagcctggctcaagaag
ctaaagagcggtaagatggatcctggctccatccctctcttcatgaacctctctgatcta
acgagactcgctgtgctctacaagtacggaggaatctatctagacacagacatcatcttc
ctcaactccatgaccgggctgagaaacgcaataggagcgcagagtctgcatcctaaaacc
aagacatggacaagactgaacaatgccgtgatggtctttgacctccaccatcccctcatg
cgtgagttcttgcacgagtactccacaactttcgacggaaacagatggggatacaacagt
ccttacctggtctctagagtcatcagtaggttaggacacaaacctgagtacaacctaacg
atctttccaccagatgctttctacccagtgaactggcttaagatcccaagtcttttcaag
aaaccggcgactacaagagaagcaaagtgggtagagaagacggtacaggagatgaacaaa
ggtagctacatgatacatctgtggaataaagtcacaaggaagatgaagattgaagaagga
agcgtcatgcatagactcatctccacacactgcactgtctgtggaaacattacagagtct
cactcttaa
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