Raphanus sativus (radish): 108808869
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Entry
108808869 CDS
T06014
Name
(RefSeq) transcription factor PIL1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108808869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108808869
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108808869
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
TPR_TRIP12_N
Motif
Other DBs
NCBI-GeneID:
108808869
NCBI-ProteinID:
XP_056844335
UniProt:
A0A9W3BY88
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Position
6:complement(53285931..53295039)
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AA seq
428 aa
AA seq
DB search
MNPKKEDQSVNSKSLPFCNSHIPKSFVQFTSVGKNLCASSSQPNMISPSSSFKPTLNDQD
YMELVCENGQILAKSRKTNNNGYFQNKRTQSILDLYETEYDESFKKNIKNLEETQVVPVS
DEHTNNKKRTRSSKNELERDLLKGNKRFESPTLNDGSLKGLQNVEAITTPDEQSTAVGRS
TKLYFKPSSILSRGTSRDLSCSLKKRKHGDNEEEETTYLSNSSDDESDDAKTRVPARTRK
TMAKRKRSTEIHKLSERKRRHEISKKMRALQDLLPNCYKNDKVSLLDEAIKYMRTLRLQV
QMMSMGNGVIQPSMMLPMGNYFPMGLGMHMGAATTTTSAPQFMPMNVQGTAFHGINNASS
HMLSAFLNHPTGLIPDSPIFSPLESCSQHLVAPSCFPETQATSLSQFPMSASTSNFEDAM
QFRGSSGY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccaagaaagaagaccaaagtgtgaattccaaatctctcccattctgcaactca
catataccaaaaagctttgttcaatttacttcagtgggaaaaaatctatgtgcatcgtcc
tcccaaccaaacatgatttctccatcatcgagctttaaaccaacattaaacgatcaagat
tatatggaacttgtttgcgaaaatgggcagattcttgcaaagagtcgaaaaaccaacaac
aacggctattttcagaataaacgaacgcaatcgatattggatttgtacgagaccgaatac
gatgagagtttcaagaaaaacatcaagaatttagaagaaacacaagttgttcctgtgagt
gacgaacataccaataataaaaagaggactaggtcctccaagaatgaattagagagagat
cttttaaaaggcaacaaacgttttgagtcaccaacgttgaatgatggttctttgaaaggt
ttacagaatgttgaagctatcacaactcctgatgagcaatctacagctgttggaagatcc
acaaaattgtactttaagccttcttctatactttctcgaggaacttctagagatctaagt
tgttctttaaagaagagaaagcatggagacaatgaagaagaagaaacaacctatctaagt
aatagttcagatgatgaatcagatgatgctaaaacacgagttcctgcgagaacaagaaag
actatggctaagagaaaacgaagcacagaaatccataagttatctgaaagaaagagaaga
cacgagatcagcaagaaaatgcgtgctttgcaggatttactacctaactgttacaagaat
gataaggtatcattgttggatgaggctatcaaatatatgaggactcttcgacttcaagtt
cagatgatgagtatgggaaatggagtaatacagccatctatgatgttgccgatgggtaat
tactttcccatgggtctaggaatgcatatgggcgcagcaacaacaacaacatcagcacca
caatttatgcctatgaacgttcaaggaaccgcttttcatgggattaacaatgcatcatca
catatgctaagtgcctttcttaatcatcccacaggactaatcccagactctcccatcttt
tctccattggaaagctgctctcagcatctggtcgctccttcatgttttcctgagactcaa
gctacttcccttagtcagtttccaatgtctgcgtcgacctcgaacttcgaagatgctatg
cagtttagaggaagcagtggttattag
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