Raphanus sativus (radish): 108809947
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Entry
108809947 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108809947
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108809947
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108809947
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108809947
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
108809947
Glycosyltransferases [BR:
rsz01003
]
Glycan extension
P blood group
108809947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
Arena_ncap_C
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
108809947
NCBI-ProteinID:
XP_018437580
UniProt:
A0A6J0JPG4
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All DBs
Position
6:complement(1334923..1336247)
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AA seq
396 aa
AA seq
DB search
MDNVIAKKVTVMFNHRRLNRSPSSLFTASAASVISLIVFTIFIVSHVLVRDFTEVVTIEI
KTVVPYLPLRSEREQSNYTITVKEDNNLHVLEAFGGRDEKFQQRATEFLRDDCEVNFMMT
WISPAVMFGKREVLSVESVFKSHPKGCLIILSSTMDSPLGFRILKPFLDRGYRVTAITPD
LPFLLKDTAGESWLEEIQTGKRDPGKISLAQNLSNLMRLAYLFKFGGVYLDTDMIVLKSF
KHLRNVIGAQTLEPVSRNWTRLNNAVLIFDKNHPLLLKCVEEFALTFNGNVWGHNGPYLV
SRVARSVEGTEGYNFTVMTPSAFYSVNWVEIEKLFKVPRTEKDLKRVQVKVLEMQRRSYG
LHLWNKFSSKFEIEQGSAMDKIVSDHCVICDKVTAS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggataacgtcatcgccaagaaagtcacggtgatgttcaatcaccggcggttaaaccgc
tcaccatcatcactcttcacagcgtctgccgcctcggtcatatctctcatcgttttcacg
atcttcatcgtctctcatgtactggttagagacttcacagaggttgtgacgatagagatc
aaaacagttgttccttacttacctctgaggtcagagagagagcaaagtaactatacgatc
acagtcaaggaggataacaatcttcacgttctcgaggcttttggaggcagagacgagaag
tttcagcagagagcaacagagtttttgagagatgattgtgaggtcaacttcatgatgacg
tggatctctcccgcggttatgttcggtaagagagaggttttgtcggtagaaagcgtgttt
aagtctcatcctaaaggttgcttgatcattttatcttcaacgatggattctcctctaggg
tttagaatcttgaaaccgtttcttgatcgtggttacagagttacagctataactcctgac
ttgcctttcctgctcaaggacacggccggagagtcttggctcgaggagattcagacaggg
aaaagagatcctggaaagatctctttagctcagaacctctcgaacctaatgagactcgcg
tacttgttcaagttcggaggtgtttatctagacactgacatgattgttctgaagagtttc
aaacacttgaggaacgtgatcggtgcgcagactctcgaaccggtttcgagaaactggacg
aggttaaacaatgcggttttgatatttgacaagaaccatcctctcttgctcaaatgcgtt
gaagagttcgcgttgactttcaacggaaacgtttggggtcataacggaccgtaccttgtc
tctagagtggctcggtccgtggaaggaaccgaggggtataacttcaccgtcatgacacct
tctgcgttttattcggttaattgggttgagattgagaagctcttcaaggttccaagaaca
gagaaggacttgaagagagttcaagtcaaggttcttgagatgcagaggagaagctatggg
ttgcatttgtggaataagtttagtagtaagtttgaaattgaacaaggaagtgcaatggat
aaaattgtttcagatcattgtgttatatgtgacaaagtcactgcatcataa
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