Raphanus sativus (radish): 108809965
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Entry
108809965 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108809965
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108809965
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108809965
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108809965
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
108809965
Glycosyltransferases [BR:
rsz01003
]
Glycan extension
P blood group
108809965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
108809965
NCBI-ProteinID:
XP_018437598
UniProt:
A0A6J0JPW3
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Position
6:complement(9970802..9972224)
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AA seq
435 aa
AA seq
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MEGSRRTEQVVLLHSLKRLIISFVCCLPVSLFGLLMVLLLIYNSFSVFSLHLDPIPPIKP
TPSLNQPQVLQHHTSSAAPLASSSKPDSSLLLAVKETTLGFAQKQKVSSIKTEKRDELTP
ATRQKPQGKTRQRFKTRINSFLSKSSCESLFFMTWISSLESFGVRERFTVESLFKSHPNS
CLILVSNSLDCERGTLILKPFTDKGLKVLAIKPDFAYIFKDTSAEKWFERLKKGMFSPGV
IPIEQNLSNLLRLVLLYKYGGIYLDTDFIVLKSLTNLHNVIGAQAVDPVTKQWSRLNNAV
LIFDKNHPLLERFINEFSVAFNGNKWGHNGPYLVSRVVARINTSSSSSEDLGFSVLPPSA
FYPADWTRIRRFYRASGNESEVNCSRKRLTQLRKHSFAVHLWNRESKKLRIEEGSIIHQL
ISVSCIFCNSSSFTF
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagtagaagaacagaacaagttgtgttattgcatagcttgaaaagattgatc
atctcttttgtttgttgtcttccagtgtctcttttcggtcttcttatggtgcttctctta
atctacaacagtttttctgtcttctctcttcatcttgacccaatcccacctattaaaccc
actccttcacttaatcaaccccaagttcttcaacatcatacatcatcagcagcaccacta
gcatcatcatctaagcctgattcttcgttgttgcttgcggtaaaagaaaccactttaggg
ttcgcacagaagcagaaagtttcctctatcaagacagagaaaagagacgagttaaccccc
gcgacgagacagaagccacaaggaaaaacaagacagagattcaagacgaggatcaactca
ttcttgtccaaatcctcatgcgagtctctgttcttcatgacttggatctcaagcctcgaa
tcttttggtgttagagaacggttcaccgtagagagtctcttcaaatctcacccaaacagc
tgcttgatcttggtatcaaactcacttgactgtgagagaggaacactaatcttgaaaccc
tttacggacaaagggcttaaggtgcttgccattaaaccagacttcgcttacatcttcaaa
gacacatcagcagagaaatggtttgaaagattaaagaaaggaatgttcagtccaggagtg
attccaatagagcagaacctctctaaccttctaagattagtcttgctctacaaatacgga
ggaatctacttagacaccgacttcatagtcctcaaatctctcaccaatctccacaacgta
atcggagcacaagcagttgatcccgttactaaacaatggagcaggcttaacaacgcggtg
ctcatctttgacaagaaccatcctcttcttgaaaggtttatcaacgagttctcagtagcc
ttcaacggtaacaaatggggtcacaacggtccatacttagtatcaagagtcgttgcaaga
atcaatacttcttcatcatcatcggaggatttgggattctctgttcttccaccatctgcg
ttttatcctgcggattggactagaatcaggagattttacagagcgtctgggaatgagagc
gaggtgaattgttcaaggaagaggcttacgcaattgcgtaaacatagctttgctgttcat
ctttggaacagagagagtaagaagcttaggattgaagaaggaagcatcattcaccaactc
atctctgtttcttgcatcttttgtaactcttcttctttcacgttttag
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