Raphanus sativus (radish): 108810169
Help
Entry
108810169 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108810169
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108810169
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108810169
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108810169
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
108810169
Glycosyltransferases [BR:
rsz01003
]
Glycan extension
P blood group
108810169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Arena_ncap_C
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
108810169
NCBI-ProteinID:
XP_018437800
UniProt:
A0A6J0JQ40
LinkDB
All DBs
Position
6:complement(1271300..1272636)
Genome browser
AA seq
396 aa
AA seq
DB search
MDNVIAKKVTVMFNHRRLNRSPSSLFTASAASVISLIVFTIFIVSHVLVRDFTEVVTIEI
KTVVPYLPLRSEREQTNYTITVKEDNNLHVLEAFGGRDEKFQQRATEFLRDDCEVNFMMT
WISPAVMFGKREVLSVESVFKSHPKGCLIILSSTMDSPLGFRILKPFLDRGYRVTPITPD
LPFLLKDTAGETWLEEIQTGKRDPGKISLAQNLSNLMRLAYLFKFGGVYLDTDMIVLKSF
KHLRNVIGAQTLEPVSRNWTRLNNAVLIFDKNHPLLLRCIQEFALTFNGNVWGHNGPYLV
SRVARSVEGTDGYNFTVMTPSAFYSVNWVEIEKLFKVPRTEKDLKRVQVKVLEMQRRSYG
LHLWNKFSSKFEIEQGSAMDKIVSDHCVICDKVTAS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggataacgtcatcgccaagaaagtcacggtgatgttcaatcaccggcggttaaaccgc
tcaccatcatcactcttcacagcgtctgccgcctcggtcatatctctcatcgttttcacg
atcttcatcgtctctcatgtactggttagagacttcacagaggttgtgacgatagagatc
aagacagttgttccttacttacctctgaggtcagagagagagcaaactaactatacgatc
acagtcaaggaggataacaatcttcacgttctcgaggcttttggaggcagagacgagaag
tttcagcagagagcaacagagtttttgagagatgattgtgaggtcaacttcatgatgacg
tggatctctcccgcggttatgttcggtaagagagaggttttgtcggtagaaagcgtgttt
aagtctcatcctaaaggctgcttgatcattttatcttcaacgatggattctcctctaggg
tttagaatcttgaaaccgtttcttgatcgtggttacagagttacacctataactcctgac
ttgcctttcctgctcaaggacacggcaggagaaacatggctcgaggagattcagacaggg
aaaagagatcctggaaagatctctttagctcagaacctctcgaacctcatgagactcgcg
tacttgttcaagttcggaggtgtttatctagacactgacatgattgttcttaagagtttc
aaacacttgaggaacgtgatcggtgcgcagactctcgaaccggtttcgagaaactggacg
agattaaacaatgcggttttgatattcgacaagaaccatcctctcttgctcagatgcatt
caagagttcgcgttgactttcaacggaaacgtttggggacataacggaccgtaccttgtc
tctagagtggctcggtccgtggaaggaaccgatgggtataacttcaccgtcatgacacct
tctgcgttttattcggttaattgggttgagattgagaagctcttcaaggttccaagaaca
gagaaggacttgaagagagttcaagttaaggttcttgagatgcagaggagaagctacggg
ttgcatttgtggaataagtttagtagtaagtttgaaatcgaacaaggtagtgcgatggat
aaaattgtttcagatcattgtgttatatgtgacaaagtcactgcatcataa
DBGET
integrated database retrieval system
