Raphanus sativus (radish): 108812363
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Entry
108812363 CDS
T06014
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108812363
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108812363
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108812363
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
108812363
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108812363
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108812363
Prokaryotic type
Other AARSs
108812363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
zf-FPG_IleRS
tRNA-synt_1e
DUF7685
Motif
Other DBs
NCBI-GeneID:
108812363
NCBI-ProteinID:
XP_018440111
UniProt:
A0A6J0JYA5
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All DBs
Position
6:complement(15851651..15858516)
Genome browser
AA seq
1072 aa
AA seq
DB search
MMQSSSYRVLSGRNYSNLRRNTPLDSFLAKGRSPVKAFSFMYVSRCSTQPNSEFGHSSKR
RSRGPVMAAKKASEGENKEEGKYKHTVDLPKTGFGMRANSLTREPELQKLWDENQVFKRV
SDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPI
ELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWADWNNPYLTLDPEY
EAAQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISRSIYAIFKLVGGV
KTSLLEEFMPNMCLAVWTTTPWTIPANAAVAVNAKLQYSVVEVQSSSEDESASPSNKKKM
VGKVLKNQQKLFVIVATDLVPTLEAKWGVKLIITKTFLGSDLEGFRYTHPIDNRDCPVVI
GGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPIVSPVDDGGNFTEEAGQFRGLSVLGE
GNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVEGFRKATMDAINN
VKWIPHQAVNRITAMTSSRSDWCISRQRTWGVPIPVFYHVQTKEPLMNEETIDHIISIIS
QKGSDAWWYMSVEDLLPEKYRDRAADYEKGTDTMDVWFDSGSSWAGVLGKREGLTFPADV
YLEGTDQHRGWFQSSLLTSIATKGKAPYSAVITHGFVLDEKGMKMSKSLGNVVDPLMVIE
GGKNSKDAPAYGADVMRLWVSSVDYTGDVLVGPQILRQMSDIYRKLRGTLRYLLGNLHDW
RVDDAVPYQDLPIIDQHALFQLESVVKNIKECYENYQFFKIFQIIQRFTIVDLSNFYFDI
AKDRLYTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAA
KFVFELKWPTLNEQWLSFPAVDILFWERLLELRTEVNKVLELARNGKLIGSSLEAKVYLH
TADAGMASKLLEMCEAQNEADTLQRIFITSQVEVLSSMEKEMVSSVQHTGEYVVGENKVW
IGVSRAEGTKCERCWNYSGQVGTFAEHPTLCGRCFNVIVANPPEPVVAAVMS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtcatcatcttacagagtattgtcaggtagaaattattcaaatttaaggagg
aacacaccgttggattcctttcttgccaagggaaggtctcccgtcaaggcgttttctttc
atgtacgtctcacggtgttcgactcagccaaacagcgagtttggtcattcatcaaagcga
cggtctcgtgggcctgttatggcagcaaagaaagcatctgaaggggaaaataaagaagaa
ggaaagtacaagcacaccgttgatttgccaaagacagggtttggtatgagagcgaattct
ctgacgagggagcctgaactccagaagttgtgggacgagaatcaggtcttcaagagagtt
tctgataataacaatggagggagtttcattcttcatgatggtcctccttatgccaatggt
gacctgcatatgggtcatgctcttaacaagatactgaaggatatcattaatcgctataag
ctgctccaaaactataaagttcagtacgttcctgggtgggattgccatggccttccaatc
gagttgaaagttctgcagtccttggatcaggaagtgagaaaggaacttacaccactaaag
ttgagggcaaaggcagcgaaatttgccaaagcaacagtcaaaacacaaatggaatcattt
aagcggtttggagtatgggcagactggaacaatccttatctcactcttgatccggaatat
gaagcggcccagattgaagtatttggccaaatggccttgcaagggtatatctataggggt
aggaaaccagttcactggagcccttcatctcgtactgctcttgcagaagctgaattagag
tatccggagggtcatatctcaagaagcatatatgctatcttcaaattggttggcggagtg
aaaacaagccttttggaagagtttatgcctaatatgtgcttggcagtatggacaactaca
ccatggactattcctgctaatgctgctgttgcggtgaatgcaaagcttcaatattctgtc
gttgaagtgcagtcatcctcagaagatgaatctgcgtctccaagcaacaaaaagaaaatg
gtggggaaagttctgaagaatcaacaaaagcttttcgtgattgtagcgaccgaccttgtg
ccaacattagaagcgaaatggggtgtgaagcttatcattactaaaacattcctaggttcg
gatcttgaaggcttcaggtacacacatccaattgacaacagggactgtccagtcgttata
gggggtgattacataactacggaatcaggaacagggttggtccacactgcccctggtcat
ggtcaggaggattatgcaactggcctgaagtatgggctgcctattgtgtctcctgtggat
gatggaggaaacttcactgaagaagctggacagtttagaggactctctgtccttggagaa
ggaaatactgctgttgtcagttacctggatgaaaatatgtctctggtcatggaagaatct
tatgctcataagtacccatatgattggcgaactaagaaacctacgatatttagagcgacc
gagcaatggtttgcatcggttgaagggtttcgcaaggccactatggatgcaatcaacaac
gtaaaatggataccacatcaggcagtaaacagaataactgccatgacttcaagtcgatct
gattggtgcatctcgagacaaaggacatggggtgtccctattcctgtcttttatcatgtt
cagacaaaagaacccctcatgaatgaagagacaattgaccatattatatctataatttcc
caaaagggtagtgatgcatggtggtatatgtcggtggaagacctacttcctgagaaatat
cgtgatagagcagctgattatgaaaaggggactgatacaatggatgtctggtttgactca
ggttcctcttgggctggtgtattggggaaacgcgagggccttactttccctgcagatgtg
tacttagaaggtacagatcagcatcgtggatggttccagagttctttgctaacaagcatc
gcaacaaaaggcaaagctccctactctgccgttataacacatggttttgtactggatgag
aagggtatgaaaatgagcaagtctttgggtaatgtggttgacccacttatggtcattgaa
ggagggaagaattcaaaggacgcacctgcgtatggggctgatgttatgcgtctctgggtt
tctagtgtagattacacaggggatgtacttgtaggcccacagattcttcggcaaatgtct
gatatatataggaagttgagaggaacgttgagatatctcttggggaatcttcatgattgg
agagttgatgatgctgttccctaccaggatttacccatcattgatcagcatgctctcttc
caacttgagagtgttgtaaagaacataaaagagtgttacgagaactaccagtttttcaaa
atattccagatcatacaacgattcacaattgtcgacctgtcaaacttctacttcgatatt
gctaaagatagactgtatactgggggaacttctagttttacccgaagaagctgtcaaacg
gttctttcaacacatcttttatccatattgagagtgatcgcgccgatagtacctcaccta
gcagaagatgtctggcaaaatctcccattcgagtacagaaacgaagatggctctgcagca
aaatttgtctttgaacttaaatggcctacgttgaacgaacaatggctttcatttcctgct
gtagatattctcttctgggaaaggcttctcgagttgaggaccgaggtgaacaaagtgctg
gagctcgcacgtaatgggaaattaatcggttccagtttagaagcaaaggtgtatcttcat
accgcagatgcaggcatggcctcaaaattattagagatgtgcgaagctcagaacgaagct
gacacactgcaacgcatattcataacatcacaggttgaggtactgtcgtcgatggagaag
gagatggtaagtagtgtgcagcacacgggagagtatgtggtaggagaaaacaaagtgtgg
attggtgtgtcacgagccgagggaaccaagtgtgagaggtgctggaactactcgggccag
gtggggacgtttgctgagcatcctactctctgtggacgctgtttcaatgtcattgtcgct
aatccgcctgagcctgtggttgctgccgtaatgagctga
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