Raphanus sativus (radish): 108813800
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Entry
108813800 CDS
T06014
Name
(RefSeq) 4-coumarate--CoA ligase-like 9
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00130
Ubiquinone and other terpenoid-quinone biosynthesis
rsz00940
Phenylpropanoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
rsz_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
108813800
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
108813800
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
108813800
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108813800
NCBI-ProteinID:
XP_018441958
UniProt:
A0A6J0K2T0
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All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
METTKNNDSRTIDHRSGYDQRTGIYHSLRSPLSLPPIDQPLSTSEYVLSLLRNSSPPATA
GKDVESATYLVDASSGDSLTYGELLRGVRSLAASLQKRFTSGDVAFVLSPASLHVPVLYL
ALMSIGVVVSPANPIGSELEVSHQVEVSRPVIAFATSQTVNKLRSSSFPLGVVIMDSPEF
LSWLTKPEDSLIPVRVNQTDTAAILFSSGTTGRVKGVLLTHRNIIASTAVSHQRTINDPV
DYDRVGLFSLPLFHVFGFAMMIRAISLGEKLVLLGRFELEAMMKAVEKYKVTGMPVSPPL
IVALVKSELTKKYDLGSLRSLGCGGAPLGKDIAERFKRKFPGVDIVQGYGLTESTGPAAA
TFGPEETVRYGSVGRISENIEAKIVDPSTGEALPPGKNGELWLRGPIIMKGYVENEKATA
ETLDQEGWLKTGDLCYIDSEGFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVVDAAV
VPFPDEDAGEIPMAFIVRKPGSNLNEAQVIDFVAKQVAPYKKVRRVAFTNAIPKNPAGKI
LRRELTKIAVSGNASKL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacgaagaacaacgacagccgtacgattgaccatcgctccggctacgatcaa
cggacaggaatctaccacagccttcgctcccctctctccttacctcccatcgaccaacct
ctctcaacctccgaatacgtcctctctctcctccgcaactcctcgccgccggccaccgcc
ggaaaagacgtcgaatccgctacttacctcgtcgacgcgagctccggcgatagcctcact
tacggagagcttctccgtggggttcgctccctcgccgcgtctttacaaaagcggttcacc
tccggagacgtcgcgttcgtcctctccccggcgtcgttgcatgtgccggtgctttacttg
gctctgatgtcgatcggagttgtggtgtctccggcgaatccgatcggatctgagctggag
gtgagtcaccaagtcgaagtcagcagaccggtgatcgcattcgccacgtcacagaccgtt
aacaagctccgttcatcttctttccctctcggagtcgttataatggactctcccgagttt
ctctcttggttaacaaaaccggaggattctctaattccggttcgagtaaaccaaaccgac
actgcagcgattctcttctcgtccgggaccacgggcagagtcaaaggcgttctcctcaca
caccgcaacataatcgcgtcaacggctgtttctcaccaacgaacaatcaacgatcccgtt
gactacgaccgcgttggactcttctctctgccgttattccacgtgttcggcttcgcgatg
atgatcagagccatctcgcttggagagaagctcgtgcttcttgggaggtttgagctcgag
gcgatgatgaaggctgtggagaagtataaggtcactggtatgcctgtgtctccgcctttg
atcgtggcgttggtgaagtcggagcttacgaagaagtatgatctcggttcgttgcggtca
ttaggttgcggcggtgctccgcttgggaaagatattgctgagaggtttaagcggaagttc
ccgggcgttgatattgttcagggctatggcttgacagagagtactgggccagctgcggct
acgtttggaccggaagagacggtaagatacgggtcagttggtcgtatctctgagaatata
gaggcgaaaatcgttgatccatccaccggagaagctttaccaccggggaagaacggtgag
ctttggctacgaggaccaatcatcatgaaaggttatgtggagaatgagaaagcaactgct
gaaacattagatcaagaagggtggttaaagactggtgatctttgttacattgattctgaa
gggtttttatatattgttgataggctaaaagaacttatcaaatacaaagcttatcaggtc
ccaccggtagaactggagcagattcttcattcgaatccggacgtggttgatgctgcagtt
gttccgtttccggacgaggatgcaggagagattccaatggctttcatagtgagaaaacca
ggaagcaatctcaacgaagcacaagtcattgactttgtagctaaacaagttgctccgtat
aagaaagtaagaagagttgctttcacaaacgcgatccccaaaaaccctgctggcaagatt
ctgcgtcgggagctaaccaaaatcgccgtgagtggcaacgcctctaagctttga
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