Raphanus sativus (radish): 108817762
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Entry
108817762 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108817762
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00020
Citrate cycle (TCA cycle)
rsz00785
Lipoic acid metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
rsz01210
2-Oxocarboxylic acid metabolism
Module
rsz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108817762
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
108817762
Enzymes [BR:
rsz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
108817762
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
108817762
NCBI-ProteinID:
XP_018446051
UniProt:
A0A6J0KEX1
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Position
7:complement(17968180..17972410)
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AA seq
1017 aa
AA seq
DB search
MVWFRAGSSVTKLAVRRILNQGTRTPRYLPSQNRSFHSSLYRPNPQTSAAAPVPRAVPLS
KLTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLGLEQREIPEDLDLALYGFTEADLDREFFLGVWQMSGFMS
ENRPVQTLRSILTRLQQAYCGSIGFEYMHIADRDKCNWLREKIETPTPWRYNRERREVIL
DRLAWSTQFENFLATKWTTAKRFGLEGGESLIPGMKEMFDRAADLGVVSIVIGMSHRGRL
NVLGNVVRKPLRQIFSEFSGGIKPVDEVGYTGTGDVKYHLGTSYDRPTRGGKKIHLSLVA
NPSHLEAADSVVVGKTRAKQYYSKDLDRTKNLGILIHGDGSFAGQGVVYETLHLSALPNY
TTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAE
WRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIKNHPSTLQIYHKKLVECGEISQ
QDIDRIQEKVNTILNEEFVASKDYLPKKRDWLSTNWAGFKSPEQISRVRNTGVKPEILKT
VGKAISSLPENFKPHRAVKKVYEQRAQMIETGEGIDWALAEALAFATLVVEGNHVRLSGQ
DVERGTFSHRHSVLHDQETGEEYCPLDHLVMNQDPEMFTVSNSSLSEFGVLGFELGYSME
SPNSLVLWEAQFGDFANGAQVIFDQFVSSGEAKWLRQTGLVVLLPHGYDGQGPEHSSARL
ERYLQMSDDNPYVIPDMEPTLRKQIQECNWQIVNATTPANYFHVLRRQLHRDFRKPLIVM
APKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVLCSGK
VYYELDDERKKVGASDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEAMNMGAFSY
ITPRLWTAMRSLGRGDMEDIKYVGRGPSAATATGFYTFHVKEQAELVQKAIGKEPIS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtttcgagctggttcaagcgtgacgaagctcgccgtacgaaggatcttgaat
caaggcacgagaacaccacgctacctcccttctcaaaaccgttcctttcactcatccctc
tacagaccaaaccctcagacctccgctgctgctcccgttcctcgcgccgtccctctctct
aagctaaccgacagcttcctagatgggaccagcagcgtctacctcgaggagcttcaacga
gcctgggaagctgatcccaccagcgttgacgagtcctgggataatttctttaggaacttt
gtgggccaggctgccacttcccctggcatctccggtcagacgattcaggagagtatgcgt
ctccttttgcttgtgagggcttatcaggtgaacggtcacatgaaagctaagctggatccc
ttgggtttggagcagagggagatccctgaggatcttgacttggctctttatggattcact
gaggctgatcttgacagagagttcttcttgggagtctggcagatgtctggtttcatgtct
gagaaccggcccgttcagacgttgcgttctatattgacgaggctccagcaggcttactgt
gggagtattgggtttgagtatatgcacattgcggatcgggataagtgtaactggttgagg
gagaagattgagactccgactccttggaggtataatagggagcgccgcgaggtgattctc
gacaggcttgcttggagtactcagtttgagaatttcttggctaccaagtggactacggct
aagaggtttgggcttgaaggtggagagtctttgattcctggcatgaaggagatgtttgac
agggcggctgatcttggagttgtgagcattgttattggaatgtctcacagagggagactg
aatgtgttgggtaatgttgttaggaagccgctacgtcagattttcagcgagttcagcggt
ggtattaagcctgtggatgaagttggctacactgggactggtgatgttaagtaccacttg
ggtacctcttatgatcgacctacaagaggtggtaagaaaatccatctctcgttggttgca
aacccaagtcacttggaagctgcagactcggttgttgttggtaaaaccagagcgaaacag
tactactccaaggatttggacaggaccaagaacttgggtattttgattcatggagatggt
agttttgctggacagggagtggtttacgagacgcttcatcttagtgctcttccgaactac
accaccggtggtaccatacatattgtggtgaacaaccaagtggctttcaccacggatcca
agagctgggaggtcttctcagtactgtactgacgttgctaaggctttgagtgctcccatc
ttccatgttaatggagatgatgttgaagctgttgttcatgcctgcgagcttgctgctgag
tggcgtcagacttttcattccgatgttgttgttgatttggtttgctacaggaggttcgga
cataatgagatagatgaaccatctttcactcagccaaaaatgtacaaggttattaagaat
catccctcaacgcttcaaatctaccacaagaagctcgtggaatgcggtgaaatatcacaa
caggatatcgacaggattcaggagaaggttaacaccattctcaacgaagagtttgttgct
agtaaagattatctacctaagaagcgagattggctttcaaccaattgggctggattcaag
tctcctgagcagatctcacgtgttagaaacactggagtcaaacctgagatacttaagact
gttggcaaggcaatttcatcgctaccggaaaacttcaagccccacagagcggtgaagaaa
gtttatgaacagcgtgctcaaatgattgaaacaggagaaggcattgattgggcacttgcg
gaagctcttgcttttgctaccttagttgtggaaggcaaccatgtccgcttgagtggtcag
gatgtcgaaagaggaacctttagtcatcgtcattctgtccttcatgaccaggaaactgga
gaagagtattgtcctctagatcatctcgtcatgaatcaggatcctgagatgttcactgtc
agcaacagttctctttcagaatttggagttcttgggtttgagttgggttactcaatggaa
agtccaaactcgttggtgctatgggaagctcagtttggagactttgccaatggtgctcag
gtgatatttgatcagttcgtcagcagtggagaagcaaagtggctgcgtcaaaccgggctt
gttgtgctacttccccatggatatgatggtcagggccctgaacattcaagtgctaggctg
gaacgttaccttcagatgagtgatgacaacccttatgtcataccagacatggaacctaca
ttgagaaagcaaatccaagaatgcaattggcagattgttaatgccaccactcctgccaac
tatttccatgttctgcgtcgtcagctacacagagacttccgtaagcctctgatcgtaatg
gcaccaaagaacttgctccgtcacaaggactgcaaatcaaacctctctgagtttgatgat
gtccaaggacaccctggttttgacaagcaagggactaggttcaagcgattgatcaaggat
cagaatgatcactctgatcttgaagaaggcatcagaagattggtactttgctccggaaag
gtttattacgagcttgatgatgagaggaagaaggttggagcaagcgatgtggctatttgt
agagtggaacagctttgtcctttcccatatgatctcattcagcgtgagctcaagagatat
ccaaatgcggagatagtttggtgccaagaagaggcgatgaacatgggagcattcagctac
ataactccaaggctatggacagcaatgagaagcttaggcagaggagatatggaagacatt
aagtacgttggtcgtggaccttctgctgctactgccactggtttctacactttccatgtc
aaagagcaagccgagctcgtccagaaagccattggaaaggaacccatcagttaa
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