Raphanus sativus (radish): 108818126
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Entry
108818126 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108818126
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108818126
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108818126
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108818126
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
108818126
Glycosyltransferases [BR:
rsz01003
]
Glycan extension
P blood group
108818126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
108818126
NCBI-ProteinID:
XP_018446503
UniProt:
A0A6J0KG03
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Position
7:76314..77855
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AA seq
386 aa
AA seq
DB search
MDHDIEKRVSDQKRLNQSSLFTAFAFSFLTLIAATTLVLMSNFSMQPQRDFSEVKRVIPQ
HLPLSSENESKSKQEKTHVVKKKIRVIEMFSGDDLSDKFQRKANEFMGDIGCEVNFVMTW
ISSSADLFGKREVFAIESVFKSHPRGCLMILSATMDSPQGYTTLKPFLDRGYRVVAVTPD
LPFLLRGTAGERWLEEIRSGKRDSGKISLAQNLSNLMRLAYLYKYGGVYLDTDMILLKSF
KGLNNTIGAQTFDPSYTNWTRLNNAVLIFDKKHPLLLKFIQEFARTFNGNVWGYNGPYLV
SRVAKAVEGSNEYNFTVMRPSAFYPXWIEIEKFFKVPKTVKESKWVKVKLLQMQRRSYGL
HLWNKFSRKFEIEQGSAMWSLVSDHS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgacatagagaagagagtgtctgatcaaaaacgactgaaccaatcatcactt
ttcaccgcgtttgcgttcagtttcttaactttgatcgcggctaccacgttggttctaatg
tctaacttctcgatgcaaccgcagagagatttctcggaggtgaagagagtgattccacaa
cacttacctctgagctccgagaacgaaagtaaaagcaagcaagagaagacacatgtggta
aagaagaagattcgagttatcgagatgttcagtggagatgacttatctgacaagtttcaa
aggaaggcgaacgagtttatgggtgatattggatgtgaagtcaacttcgtgatgacgtgg
atatcatcatcagctgatctgttcggaaagagagaggtgttcgctattgaaagtgtgttc
aagtctcatcctcgtggttgcttgatgatcctatccgcaaccatggattctcctcaaggt
tacacaaccttgaagccgtttcttgatcgtggttacagagttgttgcagtcacgccggat
ctgccttttctactaagaggaaccgcgggagaaaggtggctagaagaaataagaagcggg
aaaagagattcgggaaagatatcattagctcagaatctgtcgaatctaatgaggcttgcc
tacttgtacaaatacggaggtgtgtacttagacaccgacatgatccttctcaaaagcttc
aaagggcttaacaacacgattggagctcagacgtttgatccttcctacacaaactggacg
agactgaacaacgcggtgctaatattcgacaagaagcatcctctcttgctcaaattcatc
caagaattcgctcgaactttcaatggaaacgtgtggggatacaacggaccctacctggtt
tctcgagtggctaaagcagtggaaggatcaaatgagtacaacttcaccgtcatgcgacct
tctgcgttctatccgnngtggattgagatagagaagttcttcaaggtgccaaagacggta
aaagagtcgaaatgggtcaaggtcaagcttcttcagatgcagaggagaagctatgggttg
catctttggaataaatttagcagaaagtttgaaatcgaacaagggagtgccatgtggagt
ttagtatcagaccactcctag
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