Raphanus sativus (radish): 108818305
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Entry
108818305 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108818305
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108818305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108818305
03041 Spliceosome [BR:
rsz03041
]
108818305
03032 DNA replication proteins [BR:
rsz03032
]
108818305
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108818305
Spliceosome [BR:
rsz03041
]
Complex A
U1 snRNP components
Sm proteins
108818305
U2 snRNP components
108818305
Complex B
U1 snRNP components
108818305
U4/U6.U5 tri-snRNP components
108818305
Complex C
U2 snRNP components
108818305
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108818305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108818305
NCBI-ProteinID:
XP_018446744
UniProt:
A0A6J0KI50
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All DBs
Position
2:complement(31717663..31718672)
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AA seq
259 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPGKGKKIN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSGVAVAGPGLGRAAGRGVPTGP
LVQAQPGLSGPVRGVGGPSPGMMQPQISRPPVMRPPGQMLPPPPAFGGPPPPMGRGVPQG
PPPNYGMRPPPQFGGPLPPYGQRPMGPPPGGMMRGPPPPPHGMQGPPPGPPRPGMQPPPG
GFAPQRPGPPPPNPHNQQQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgctccagttcataaactacaggatgcgagtgacg
atccaagacgggaggcagctcgtggggaagttcatggccttcgaccgccacatgaacctc
gtcctcggcgactgcgaggagttccgcaagctccccccggggaaaggaaagaagatcaac
gaggagagggaagatcgccgtacgctgggtttggttctgctgagaggcgaagaggttatc
tccatgacggtggaaggaccgcctcctcctgaagagtcacgtgccaaggctggatcagga
gtcgctgttgctgggcctggattgggccgtgccgctggacgtggagtgccgactgggccg
ctcgttcaagctcagcctgggctttctgggcctgttcgtggagtcggtgggccgtctccg
gggatgatgcagccgcagatctctcgtcctccggtgatgcggcctccgggacagatgctt
ccgccgccgcctgctttcggtggtcctcctcctccgatggggagaggtgttcctcaaggt
cctcctccgaattacggtatgaggcctccgccgcagtttggtggaccgctgcctccgtat
gggcagagaccgatgggacctccgcctggtgggatgatgagaggtcctcctccaccgcct
catgggatgcagggacccccgcctgggccgcctcgccctggaatgcagcctcctcctgga
gggtttgctccacagcgtccggggccaccaccgcctaatccacataatcagcagcagtga
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integrated database retrieval system
