Raphanus sativus (radish): 108819102
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Entry
108819102 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108819102
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108819102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108819102
03041 Spliceosome [BR:
rsz03041
]
108819102
03032 DNA replication proteins [BR:
rsz03032
]
108819102
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108819102
Spliceosome [BR:
rsz03041
]
Complex A
U1 snRNP components
Sm proteins
108819102
U2 snRNP components
108819102
Complex B
U1 snRNP components
108819102
U4/U6.U5 tri-snRNP components
108819102
Complex C
U2 snRNP components
108819102
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108819102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108819102
NCBI-ProteinID:
XP_018447594
UniProt:
A0A6J0KKQ0
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All DBs
Position
8:12471436..12473121
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AA seq
248 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHTNLVLGDCEEFRKLPPGKGKKIN
EEREERRTLGLVLLRGEEVISITVEGPPPPEESRSKAAGSAAAALAGGPGVGRAAGRGVP
TGPLVHAQPGLSGPVRGVGGPSPGMMQPQISRPPVMRPPPPPPAFGGQGLPPRGPPPNYG
MRPPQFGGPPPPQYGQRPMGPPPGGMMMRGPPPPPHGMQGPPPPRPGGFPPRPGMQGPPP
PNQYNQQQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgctccagttcataaactacaggatgcgagtcaca
atccaagacggaagacaactcgtcggcaaattcatggccttcgaccgccacacgaacctc
gtactcggcgactgcgaggagttccgcaagcttccccctggtaaaggcaagaagatcaac
gaggagagagaagagcgccgcacgctcggcttggtcttgctcagaggcgaagaggttatc
tccattacggtcgaaggaccgcctcctcccgaagagtctcgctccaaagcggcgggctca
gcagctgcggctcttgctggtgggcctggagtgggccgtgcagctggacgcggagtgcct
acgggcccgctagttcatgctcagcctgggctttcgggcccggttcgtggagtcggtggg
ccttcgccggggatgatgcagcctcagatctctcggcctccggttatgaggcctccgcct
ccgcctcctgcttttggtggtcaaggtcttcctcctcgaggtcctcctccgaattacggt
atgaggccaccgcagtttggtggaccgccgccgcctcagtatgggcagaggcctatgggt
cctcctcctggtggtatgatgatgagaggtcctcctccacctcctcatgggatgcaggga
ccgcctccgcctcgacctggtggttttcctccgcgtcccggcatgcaaggaccgcctccg
cctaatcaatataatcagcagcagtga
DBGET
integrated database retrieval system
