Raphanus sativus (radish): 108826010
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Entry
108826010 CDS
T06014
Name
(RefSeq) ent-copalyl diphosphate synthase, chloroplastic
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00904
Diterpenoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
108826010
Enzymes [BR:
rsz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
108826010
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Motif
Pfam:
Terpene_synth
Terpene_synth_C
SQHop_cyclase_C
Motif
Other DBs
NCBI-GeneID:
108826010
NCBI-ProteinID:
XP_018454879
UniProt:
A0A6J0L5V4
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Position
9:22683087..22690424
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AA seq
809 aa
AA seq
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MSLQYYALNSIQSNNLFSTKTPVSHSSSYSLSSYVLKISGPPLSLGRDKPRSSSIYCTKL
RTQEYPNSQEIQRDLPLIHWQQVQGDDAPQISIGSNDIAIEEAVKRVKSILRNLSDGEIT
ISAYDTAWVALIDSGDKTPAFPSAVKWIANNQLSDGSWGDAHLFSYHDRLINTLACVVAL
TSWNLFPHLCHKGIMFFRENIGKLEEEDDEHMPIGFEVAFPSLLEIARGINIDVPYDSPV
LKDIYAKKELKLTRIPKEIMHKIPTTLLHSLEGMRDLDWEKLLKLQCQDGSFLFSPSSTA
FAFMQTRDSKCLGYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKEC
LDYVHRYWTDKGICWARCSHVQDIDDTAMAFRLLRLNGYKVSADVFKVFEKEGEFFCFAG
QSNQAVTGMFNLYRASQLAFPREEILKNAKEFSSKYLHHKQEKSELLDKWIIMKDLPGEI
GFALEIPWYASLPRVETRFYIEQYGGENDVWIGKTLYRMPYVNNNEYLELAKQDYNNCQA
LHQLEWDTFKKWYEENWLSEWGLSRSELLECYYLAAATIFEAERSHERMVWAKSSVLVKA
IFSSFGESSYSRRSFFDQFHNYIANARQSDPHFNNRSMRLDRPGSVQASGLVGILIRTLN
QISIDHYMSHGRDVNGLLYQSWGDWLEKWKLDGDEGYGELLVKMIILMKNNDLTNFFSHP
RFVCLSEIINGINLIAQYLKTMRNDEKEKTIKRMENEMEQMVELVLLEVDTLRDVCITFL
DVAKAFYYSASCGDHLQTHIAKILFQKVR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacaatactatgcccttaactctattcaaagtaacaacttgttcagtactaaa
acaccagtttctcattcttctagttattctctctcttcttatgtccttaagatctcagga
ccaccgctaagtttggggagagacaaacccagaagcagctccatatattgtacaaagctt
cgaactcaagaataccctaattctcaggaaattcaacgtgatctacctctaatacattgg
caacaggttcaaggagatgatgctcctcagattagtattggaagtaatgatattgcaatc
gaagaagcagtgaaaagagtgaagtccattttgagaaacttaagtgacggtgaaattacg
atatcggcttatgatacagcttgggttgctttgatagactccggagataaaactccggcg
tttccctccgccgtgaaatggatcgccaacaatcaactctccgatggttcatggggtgat
gcccatctcttctcttatcatgaccgtctcatcaacacacttgcctgcgtcgttgctcta
acatcatggaatctctttccccacctatgccacaaaggaatcatgttttttagagaaaat
atcggaaagctagaagaagaagacgatgagcatatgcctattggattcgaagtggcattt
ccttcattacttgagatagctcgaggaataaacatagatgtaccgtacgattctcctgtc
ttgaaggatatatacgccaagaaggagctaaagctaacaaggataccaaaagagataatg
cacaagataccaaccacattgttgcatagtttggagggcatgcgtgatttagactgggaa
aagctattgaaacttcagtgtcaagatggatctttcctcttctctccttcttctacggct
ttcgcattcatgcagacccgagacagtaagtgtcttggatatttgcgcaatgcagtcaaa
cgcttcaatggaggagttcccaatgtatttcctgtggatcttttcgagcacatatggatc
gtcgatcggctacaacggttagggatatcgagatactttgaagaagagattaaagagtgt
cttgactatgttcacagatattggacagacaaaggcatatgttgggctagatgttcccat
gtccaagatatcgacgatacggccatggcatttaggctcttaagacttaatggatacaaa
gtttccgcggatgtgttcaaggtctttgagaaagaaggagagtttttctgcttcgcgggg
caatcaaaccaagcggtgaccggtatgttcaatctatatcgagcatcgcaattggcgttt
ccaagggaagagatattgaaaaacgccaaagaattctcgtccaagtatctgcatcataaa
caagagaaaagcgagttgcttgataagtggattataatgaaagacttacctggcgagatt
ggcttcgcgttggagattccatggtacgcaagcttgccccgagtggagacgagattctat
attgagcagtatggtggagaaaacgacgtttggattggcaagaccctttataggatgcca
tatgtgaacaataatgaatatctggaattagcaaaacaagactacaacaattgccaagct
ctgcatcaactcgaatgggacactttcaaaaagtggtatgaagaaaattggttaagtgag
tggggtctgagtagaagcgagcttctagagtgctattacctagcggctgcgactatcttt
gaggcagagaggtcacatgagagaatggtttgggctaaatcaagtgtattggttaaagcc
attttttcctctttcggtgaatcctcttactcaagaaggagcttcttcgatcagttccat
aactatattgccaatgctcgacaaagtgatcctcacttcaataacaggagtatgagattg
gaccgaccaggatcggttcaggcgagtgggctagttggaatcttaatcagaactttgaat
cagatatcgattgatcattacatgtctcatggtcgtgacgttaacggtctcctctatcaa
tcgtggggagattggctggagaaatggaaattagatggagatgaaggatatggagagctc
ctggtgaagatgataattctaatgaagaacaatgacctaactaacttcttctctcatcct
cgctttgtttgtctctcggaaatcatcaacgggatcaatcttattgcccaatacctaaag
acaatgagaaacgatgagaaagagaagacaataaagagaatggagaatgagatggagcaa
atggttgagttagtattattggaggttgacacattacgtgatgtctgcatcacgtttctc
gatgttgcaaaagctttttactattctgcttcatgtggtgatcatctccaaactcacata
gccaaaatattgtttcaaaaagttcgataa
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