Raphanus sativus (radish): 108827262
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Entry
108827262 CDS
T06014
Name
(RefSeq) transcription factor MYC1
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108827262
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108827262
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Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
108827262
NCBI-ProteinID:
XP_018456140
UniProt:
A0A6J0L7D9
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Position
9:24235144..24238495
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AA seq
553 aa
AA seq
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MSLAIMADGVETERGGSKRKNSLLRKQLAVALRSVQWSYAIFWSSSPTQSGVLEWEEGCY
NGDIKKRKKRYEAAHYKYALQRSNQLRKLYLCMLEGDSNTTISTTHDVNDHGDDEEHNCN
GTTSMMLSPDDLSDEEWYYLVSMSYVFSPSQCLPGRALATGETIWLCNAQYADNKLFSRS
LLARSASIQTVVCFPYLGGVIELGVTELISEDHSLLQHVKFCLLETSKPDCVSLNFSAHH
DSDDEKDQMKIKISDANSNSLLQENHQIQFGTSDEDVHYKRTVSTLLKYAAYKNVHHLQP
DQVSSNTGSSFLRWKQREQPNSILLQEQSNFQPSSQNVLRKILQDVPLMHSLDTKRMSPS
KMFGLNQDDDPWDRSKENEKFSVLRAMVPTVNEVDKESILNNTIKYLQELEERVEELESC
MGSVNFVERQRKSANVNDSVLIEETSGNYDNSTKIDGNSGETEKVTIFRDETHLRVKLKE
TEVMMEVRCSYRDYIVADIMETLSKLHMDAFSVRSHTLNGFLTLNLKAKFRGAAVASVGM
IKRELRRIIGAII
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgcaataatggctgatggtgtcgaaacagaaagaggaggaagtaaaagaaaa
aacagcttattaagaaaacaacttgctgtagctctgagaagtgttcagtggagctatgca
atcttctggtcctcttcacctactcaatctggggttttggagtgggaagaaggatgttat
aatggggatataaagaagaggaagaagagatacgaagctgctcattataaatatgcgttg
cagagaagcaaccaacttaggaaactttatctgtgcatgctggaaggagacagtaatact
actattagtactactcatgatgttaatgaccatggtgatgatgaggaacataattgtaac
ggtactacaagtatgatgttgtcaccagatgatctctctgatgaagagtggtattattta
gtctccatgtcctatgtcttctctccttctcaatgtttgccaggaagagctttggcgacg
ggtgagaccatatggctttgcaacgctcagtacgcagataacaaactcttctctcgttct
ttattagcaagaagcgcatcaattcagactgttgtgtgtttcccttacttgggcggtgtt
attgagcttggtgtcacagaactgatttcagaagatcatagcctgcttcaacacgtcaaa
ttttgcttgttggaaacttctaaaccggattgcgtttcattaaacttctctgctcaccac
gacagcgatgatgagaaggatcaaatgaaaattaagatcagcgatgcaaactcaaactca
ttgctccaagagaaccatcagattcaatttggtacgtctgatgaagacgttcattacaaa
agaactgtctcaacactactcaaatacgctgcttataaaaatgttcatcatctccaaccg
gatcaagtttcttctaatactggctcaagtttcttgcggtggaagcaacgtgagcagcca
aactcaattctgcttcaagaacaaagcaatttccagccgtcgtcacagaatgtgctgagg
aagatattgcaagacgtacctttgatgcattctttagacacaaagagaatgtccccaagt
aagatgtttggtctgaatcaagatgatgatccttgggatagaagtaaagagaacgaaaag
ttcagtgtccttagagctatggtacccactgtcaacgaggttgataaagaatcaatactg
aacaacacaatcaagtacttgcaagaactagaggaaagagtagaagagctagaatcttgt
atgggctcagttaatttcgtagagagacaaagaaagagcgctaacgttaacgactctgtg
ttgatcgaggagacatcagggaactatgataacagcacgaagatcgatggaaactcagga
gaaaccgaaaaagtcactattttcagagatgagactcatttgagagttaaactgaaagaa
acagaagttatgatggaagtaagatgttcttacagagactacatagtggcagacatcatg
gaaactcttagcaaacttcacatggatgctttctctgttagatctcacacacttaatggg
ttcctcacacttaatctcaaggcaaagtttcgtggggctgcagttgcgtcggtagggatg
attaagagagagctgaggagaatcattggtgcgattatatga
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