Raphanus sativus (radish): 108827996
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Entry
108827996 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108827996
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00020
Citrate cycle (TCA cycle)
rsz00785
Lipoic acid metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
rsz01210
2-Oxocarboxylic acid metabolism
Module
rsz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108827996
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
108827996
Enzymes [BR:
rsz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
108827996
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
108827996
NCBI-ProteinID:
XP_018457029
UniProt:
A0A6J0LBM6
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Position
9:34080117..34084164
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AA seq
1014 aa
AA seq
DB search
MVWFRAGSNVTKLAVRRLLNQGSSYATRTRSFHSSLYRPNPHPSSSSSPIPRAVPLSKLT
DSFLDGTSSVYLEELQRAWESDPTSVDESWDNFFRNFVGQAATSPGISGQTIQESMNLLL
LVRAYQVNGHMKANLDPLALEQREIPEDLDLALYGFTEADLDREFFLGVWQMSGFMSENR
PVQTLRSILTRLQQAYCGNIGFEYMHIADREKCNWLREKIETPTPWRYNRERREVILDRL
AWSTQFENFLATKWTTAKRFGLEGGESLIPGMKEMFDRAADLGVESIVIGMSHRGRLNVL
GNVVRKPLRQIFSEFSGGIRPVDEVGYTGTGDVKYHLGTSYDRPTRGGKKIHLSLVANPS
HLEAADSVVVGKTRAKQYYSKDVDRTKNLGILIHGDGSFAGQGVVYETLHLSELPNYTTG
GTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAEWRQ
RFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIKNHPSTLQIYHKKLLECGEISQEDI
DRIQEKVNTILSEEFVTSKDYLSKKRDWLSTNWAGFKSPEQISRVRNTGVKPEILKTVGK
AISSLPENFKPHRAVKKVYEQRAQMIETGEGIDWALAEALAFATLVVEGNHVRLSGQDVE
RGTFSHRHSVLHDQETGEEYCPLDHLVMNQDPEMFTVSNSSLSEFGVLGFELGYSMESPN
SLVLWEAQFGDFANGAQVIFDQFISSGEAKWLRQTGLVVLLPHGYDGQGPEHSSARLERY
LQMSDDNPYVIPDMEPTLRKQIQECNWQIVNATTPANYFHVLRRQLHRDFRKPLIVMAPK
NLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVLCSGKVYY
ELDDERKKVGASDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEAMNMGAFSYITP
RLWTAMRSLGRGDMEDIKYVGRGPSAATATGFYTFHVKEQAELVQKAIGKELIN
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtttcgagccggctcgaacgtgaccaagctcgccgtacgaaggctcctgaat
cagggcagttcatacgccacaaggacacgctccttccactcatctctctacagaccaaac
ccacatccctcctcctcctcatctcccatcccccgagccgtccctctctccaaactaaca
gacagcttcctagatggcaccagcagcgtctacctcgaggagctccaacgtgcctgggaa
tccgaccccaccagcgtcgacgagtcctgggacaacttcttccgaaacttcgtaggccaa
gccgccacttccccaggcatctccggccaaaccatccaagaaagcatgaacctcctgctc
ctcgtcagagcctaccaagtcaacggccacatgaaagccaacttagatcccttagctctc
gaacagcgagagatccccgaggatctcgacttggctctctacggattcacagaagctgat
ctcgacagagagttctttctaggagtctggcagatgtccggcttcatgtcagagaatcgc
cccgtgcagactctccgctctatactgacgaggctacagcaggcttactgtgggaacata
gggttcgagtatatgcacattgctgatagggagaaatgtaattggcttagagagaagatc
gagacgccgactccctggagatacaacagggagcggcgcgaggtgattctcgataggctt
gcttggagcactcagtttgagaatttcttggctaccaaatggacaactgctaaaaggttt
gggctcgaaggtggggagtcgttgatccccgggatgaaggagatgtttgatagagcggcg
gatctcggagttgagagcattgttattgggatgtcacacagagggagactgaatgttttg
gggaatgttgtaaggaagccgttgcgtcagatctttagtgagttcagcggtgggattagg
cctgtggatgaggttggatacactggaactggtgatgttaagtatcatttgggaacctct
tacgataggccaacgagaggtgggaagaagattcatctctctttggttgcgaacccgagt
catttagaagctgcggattcggttgttgttggtaagacaagagcgaagcagtactactcc
aaggatgttgacaggaccaagaacttggggattttgattcacggagacggtagcttcgct
ggacagggagtggtttacgagacgcttcatcttagtgagcttcctaactacacaaccggt
ggtactatccatattgtggtgaacaaccaggtggctttcactactgatccgagagctggg
aggtcttctcagtactgtaccgatgtcgccaaggccttgagtgctcctatctttcatgtg
aatggtgatgatgttgaggctgttgttcacgcctgcgagcttgctgctgagtggcgtcag
aggtttcattccgatgttgtggttgatttggtttgttacaggaggtttgggcataacgag
attgatgagccgtctttcactcagccgaagatgtacaaggtgatcaagaaccatccctcc
acgcttcagatataccacaagaagttgttggagtgcggtgagatatcgcaggaggatatt
gataggatacaggagaaggttaacaccattctgagtgaagagttcgttactagtaaagat
tatttgtctaagaagcgtgattggctttcaactaattgggctgggttcaagtctcctgag
cagatctcacgtgttagaaacacaggcgtcaagccagagatacttaagactgttggcaag
gcgatttcgtcgcttcctgaaaacttcaagccacacagagcggtgaagaaagtttatgaa
caacgtgctcagatgattgaaacaggagaaggtattgactgggcgcttgcggaggctctt
gcttttgctaccttggttgtggaaggcaaccatgtccgtttgagtggtcaggatgtcgag
agaggaacctttagccatcgtcactctgtgcttcatgaccaggaaactggagaagagtat
tgtcctctagatcatctcgtcatgaaccaggatcctgagatgttcactgtcagcaacagt
tctctttcagagtttggtgtccttgggtttgaactgggttactcaatggaaagccccaac
tcgttggtgttatgggaagctcagtttggagactttgcaaatggagctcaggtgatattt
gatcagttcatcagcagtggagaagctaagtggctgcgtcaaaccgggcttgttgtcctg
cttccccatggatatgatggtcagggccctgaacattcaagtgctaggctggaacgttac
cttcagatgagtgatgacaacccctatgtcataccagacatggaacctacattgagaaag
cagattcaagaatgcaattggcagattgtcaatgccaccactcctgccaactacttccac
gttctgcgtcgacagctgcacagggatttccgtaagcctctgattgtaatggcaccaaag
aacttgctccgtcacaaggactgcaaatcaaacctctctgagtttgatgatgtccaaggc
cacccaggctttgacaagcaagggactaggttcaagagattgatcaaggatcagaacgat
cactctgatctcgaagaaggcatcagaagattggtactctgctctggaaaggtttattac
gagcttgatgatgagaggaagaaggttggtgcaagcgatgttgctatttgtagagtggag
cagctttgtcctttcccatatgatctcattcagcgtgagctcaagagatatccaaatgct
gagatagtttggtgccaagaagaggcgatgaacatgggagcattcagctacataacccca
aggctgtggacagcaatgagaagcttaggcagaggagatatggaagacatcaagtacgtt
ggtcgtggaccttctgctgctactgccactggtttctacactttccatgtcaaagagcaa
gctgagctcgtccagaaagccatcggaaaggaactcatcaactga
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