KEGG   Raphanus sativus (radish): 108830225
Entry
108830225         CDS       T06014                                 
Name
(RefSeq) putative DNA glycosylase At3g47830 isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108830225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108830225
Enzymes [BR:rsz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     108830225
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     108830225
 Prokaryotic type
     108830225
SSDB
Motif
Pfam: HhH-GPD USP47_C
Other DBs
NCBI-GeneID: 108830225
NCBI-ProteinID: XP_018459324
UniProt: A0A6J0LI53
LinkDB
Position
3:18492381..18493790
AA seq 287 aa
MNKSLKRKRSLKNDDGDSKPPACKNLTVDGGDPYPELLRPTSDECRDVRDALLSLHGFPP
EFASYRRQRLRTLSSVDGHDTECSEKEEESVLDGLVKILLSQNTSEANSQRAFASLKAQF
PKWEDVLVAEPKLIENAIRCGGLAPKKTVCIKNIMSRLQNERGRLCLEYLRGLSVEEVKT
ELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVYEISKALGWVPKTADRNRTYVHLNRRIP
DELKFDLNCLLYTHGKLCSNCKKNVAKPKAKVASSDDCPLLGFSGLV
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaataaatccctaaaaaggaaacgctcactcaaaaacgacgacggcgactcaaaaccc
ccggcctgtaaaaatctcaccgtagacggcggcgatccttatcccgaactcctcagacct
acgtctgacgaatgtagagacgtaagggatgctttgctgtctctccatggattccctccc
gagttcgccagttaccgccgtcagagactccgaacactttcctccgtagatggtcacgac
acagagtgttcggagaaggaggaggagagtgtgcttgatgggcttgtcaaaattcttctt
tcgcagaatacgagtgaggccaattctcaaagggcctttgcttctctcaaagctcaattt
cctaaatgggaagatgttttggttgctgagccaaaattaattgagaatgctatcaggtgt
ggaggattggcccctaaaaagactgtctgtatcaaaaacattatgagccgcctgcagaac
gagagaggcagattgtgcttggagtatctgcgcggtttatcggtagaagaagtaaaaact
gagctctcccattttaaaggagtaggtcccaaaacggtttcttgtgttctgatgttcaac
ctccaacacaatgatttcccagtagacacccatgtatatgagatctccaaggcgttaggt
tgggtcccgaaaaccgcagacaggaacagaacctatgttcatctcaaccgtaggatcccg
gatgagctcaagtttgatctgaactgtctgttatatacacatggtaagctctgcagcaac
tgcaagaagaatgttgcgaaaccaaaagctaaagtagcgtcatctgatgattgccctctc
ctggggttttctggtttagtctag

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