Raphanus sativus (radish): 108838242
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Entry
108838242 CDS
T06014
Name
(RefSeq) probable glutamate carboxypeptidase LAMP1
KO
K01301
N-acetylated-alpha-linked acidic dipeptidase [EC:
3.4.17.21
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108838242
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.21 glutamate carboxypeptidase II
108838242
Peptidases and inhibitors [BR:
rsz01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
108838242
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Gene cluster
GFIT
Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
Nicastrin
Peptidase_M20
Motif
Other DBs
NCBI-GeneID:
108838242
NCBI-ProteinID:
XP_056858416
UniProt:
A0A9W3D3U4
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All DBs
Position
2:19127653..19131524
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AA seq
680 aa
AA seq
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MSITATSLVFLLAALSYLLFSSPPKPHFHTLFLSASFSDNASIALNLRTLTRRPHVAGSE
ANAEAAAFVRSAFASSSLKTHLVSYQVSLTYPLHRSLVLTPNESSKNQITFALEQEHVVG
DNNNPYAKEVTPTFHGYAKSGNVSGPAVYANYGRVQDFAALNVSGAVVVARYGEIYRGDI
VRNAYSAGAVGVVIYTDKRDYGGGGGDECFPVSKWMPPSGVQVGSVYNGLGDPTTPGWAS
VDGCERLSEEAVELSGDSPLIPSLPISAADAEVILKSIVGDVAHGDVYPVGPGPGILNLS
YIGKTVIAQIENVIGVIEGEEEPDRYVILGNHRDAWSFGAVDPNSGTAVLLEIAQRLDKL
HRRGWKPRRTIILCNWDAEEYALIGSTEWVEENREMLASRAVAYLNIDCAVSGPGFRASA
TPQLDELIKQAAREVQDPDNSTQTIYDSWVGSSNSGVIGRLGDLTSDYAAFVQHVGVPAA
DMRFGGGYPVYHSMYDDFTWMEKFGDPMFQRHVAMASVLGLVALRLADEEVLPFNYVSYA
SELMKSAEDLEKEKLDHSIDVSPLIKSIQDLCTAAQGIHIEKEGVKGALKVRKLNDRLMM
AERALTDRDGLSGRPWYKHLVYGPAKYDDYGSKSFPGIDDAIDNAKRLKTEVSWGLVQHE
IWRVSRAVRHASLVLKGVLR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataacagcaacatctcttgtcttccttctcgctgctttatcttacctcctcttc
tcttctccaccaaaaccacacttccatactcttttcctctcagcctccttctccgacaac
gcttccatcgccttaaacctccgtaccctcacccgccgcccccatgtagccggttcagag
gccaacgctgaagccgcagcctttgttcgctctgccttcgcctcctcctccctcaaaaca
cacctcgtctcttaccaagtatctctaacctacccacttcaccgctccctcgtactaaca
ccaaacgaatcttcaaaaaaccagatcactttcgctttagaacaagaacacgtcgtcgga
gacaacaacaacccttacgcaaaagaagtgacgcctacgttccacggatacgctaagtca
ggcaacgtctcgggtcccgcggtttacgcgaactacggacgagtccaagacttcgctgct
ctgaacgtctccggagccgtcgtggtcgcgaggtacggagagatttacagaggagacata
gtgaggaacgcgtacagtgcgggagctgttggcgttgtgatatacacagacaagagagac
tacggcggcggcggaggagacgagtgttttccggtgagtaagtggatgccgccgagtggt
gttcaagtgggttctgtttataacgggttaggtgatccgacgactcctgggtgggcgagc
gttgatgggtgtgagagattatctgaggaggctgtggagttgagcggcgactctccgcta
ataccttcgcttcctatctcggcggctgatgcggaggtgatcttgaagagtatcgtcggt
gatgttgctcatggtgatgtttatcctgtggggcctggacctgggatcttgaacctgagt
tacattgggaaaactgttatagctcagattgaaaatgttattggagtgattgaaggcgaa
gaagagcctgatagatatgtgattcttggaaaccatcgagacgcttggagttttggagct
gttgatcccaacagtgggactgctgtacttttggagattgcgcaaaggctagataagctg
cacagaagaggatggaagcctagacggacgattattctgtgtaactgggatgctgaggag
tatgctctgattggttcaacggaatgggtagaagaaaacagagagatgttagcttcaaga
gcagtggcttacttgaatatagattgtgctgtatctggtccagggtttcgtgcttctgcg
actccacaactcgatgaactgatcaaacaagcggctcgagaggtccaggatccagataat
tcaacacaaaccatctatgattcgtgggtaggatcaagcaactctggagtgattggaaga
ttaggggacctgacatcagattacgcagcatttgtgcaacatgttggtgttccagcagct
gacatgcgtttcggaggaggctatccagtctatcactctatgtatgatgacttcacttgg
atggaaaaatttggagacccaatgtttcagcgacatgtggccatggctagtgttctaggt
ttagtcgctcttaggttagcagatgaggaagtcttaccattcaactatgtctcttatgct
tcagaactgatgaaaagtgcagaagatttggagaaggagaagctagaccatagcatagat
gtttctccgttaatcaaatcgatccaagatctatgtacagctgctcaagggatacatata
gagaaagagggagtcaagggagctttgaaagtgagaaagctcaacgacaggttgatgatg
gcggagcgagctttaacagacagagacggactttctggaagaccatggtacaagcatttg
gtatatggaccagctaagtatgatgattacgggtcaaaatcatttcctgggattgatgat
gcaatagataatgcaaagaggctaaagacggaagtttcttggggacttgttcaacacgag
atatggagagtctctagagctgtgagacatgcgtcacttgtcttaaagggtgtattgaga
tga
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