Raphanus sativus (radish): 108842495
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Entry
108842495 CDS
T06014
Name
(RefSeq) xanthine dehydrogenase 1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00230
Purine metabolism
rsz00232
Caffeine metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01232
Nucleotide metabolism
rsz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
108842495
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
108842495
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108842495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108842495
Enzymes [BR:
rsz01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
108842495
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
108842495
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108842495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
Ald_Xan_dh_C
CO_deh_flav_C
Fer2
Motif
Other DBs
NCBI-GeneID:
108842495
NCBI-ProteinID:
XP_018470921
UniProt:
A0A6J0MHB7
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All DBs
Position
2:complement(39894409..39900599)
Genome browser
AA seq
1358 aa
AA seq
DB search
MGSLKNEGGEFMEAILYVNGVRRVLPDGLAHMTLLEYLRDIGLTGTKLGCGEGGCGACTV
MVSNYDLKSKTCVHYAVNACLAPLYSVEGMHVITIEGVGHRKLGLHPLQETLASSHGSQC
GFCTPGFIMSMYALLRSSKNSPCEEEIEECLAGNLCRCTGYRPIVDAFRVFAKSDDALYC
GVSSLSLQDGSTICPSTGKPCSCGSKETNGAANCSEDRVQSISYSDIDGAKYTEKELIFP
PELLLRKLFPLKLRGNGGLTWFRPVSLQNLLQLKANYLDAKLLVGNTEVGIEMRLKRLQY
QVLISVAQVPELNALNVDDSGVELGSGVRLSELLKLFRRVVKERPEHETSACKAFIEQLK
WFAGTQIRNVACIGGNICTASPISDLNPLWMASRAEFRIISCNGVVRSIPAKDFFLGYRK
VDMASNEILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLEEKGQELFVSDAS
IAYGGVAPLSLRARKTEEFLIGKKWNKGLLQDALNVIQSDVLIKEDAPGGMVEFRKSLTL
SFFFKFFLWVSHDVHNVYPTIETFPPSHISAVQPVPRLSRSGKQDYDTVKQGTSVGSPEV
HLSARMQVTGEAEYTDDTPVPPNTLHAALVLSKVPHALILSIDDSAAKSSLGFVGLFLAK
DIPGDNMIGPVVADEELFATDVVTCVGQVIGVVVADTHENAKTAAGKVEVKYEELPAILS
IKEAINAKSFHPNTEKRLRKGDVELCFQSGECDRIIEGEVQIGDQEHFYLEPHGSLVWTL
DGGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAV
PSYLLNRPVKLILDRDVDMMITGHRHSFIGKYKVGFTNEGKILALDLEIYNNGGNSLDLS
LAILERAMFHSDNVYEIPHVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAAEL
DKSPEEIKEMNFQEEGSITHYSQSLQYCTLQQLWTELKASSNFLNARREADEFNSHNRWK
KRGVAIVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAF
NIPLSSVFVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARMEPVASKHSFNTFA
ELVSACYFQRIDLSAHGFHIVPDIGFDWISGKGNAFRYYTYGAAFAEVEIDTLTGDFHTR
AADIMLDLGYSLNPAIDVGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGTLLTCGPGNY
KIPSINDVPFNLNVSLLKGNPNKKAIHSSKAVGEPPFFLASSVFFAIKEAIKAARTEVGL
TNWFPLETPATPERIRMACFDEFSAPFISSDFSPKLSV
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgctgaagaacgagggaggggagtttatggaggcgatactctacgttaacggc
gttcgtcgagtgttgccagatggtttggctcatatgacgcttcttgaatacctcagagat
ataggactgaccgggacaaagctgggatgcggcgaaggtggttgtggggcttgcactgtg
atggtctctaactatgacttgaaatccaagacatgcgtgcattatgctgtcaacgcttgc
ttagcacctctttattccgtagaaggaatgcatgtaataaccattgagggagttgggcat
cgcaaactcggtttgcacccacttcaggaaacattggcatcttctcatggttcccagtgt
gggttttgtactcctggttttatcatgtccatgtatgcgttattgaggtcaagtaagaac
tcaccttgtgaagaggagattgaagaatgccttgctgggaatttatgtcgatgtactggt
tatagacccatcgttgatgcgtttcgggtgtttgcaaaatctgacgatgctctttactgt
ggagtatcctcacttagccttcaagatggttctactatctgcccatctactggcaaacct
tgttcttgtggatcaaaagaaactaatggagcagctaattgtagtgaagatagagttcag
tccatctcttacagtgacatagatggggctaagtacactgaaaaggagcttatttttcct
cctgagcttcttctgaggaaattatttcctttaaagttaagaggaaatgggggactcaca
tggtttagacccgtaagccttcagaacttacttcagctcaaagcaaattatcttgatgct
aagctgcttgtggggaatacggaggtgggaattgaaatgagactgaagaggttgcagtat
caggtgctaatctctgttgctcaagtcccagagcttaatgcattgaacgtagatgacagt
ggagtagagcttggttcgggtgtgagactttctgaactcttgaagttattcagaagggtt
gtaaaggagcgtcctgagcatgaaacatcagcatgcaaggcttttattgaacagctaaag
tggtttgctgggacacagataagaaacgttgcgtgcattggtggaaacatttgtacagct
agtccaatatctgatttaaatcctctttggatggcgtcaagagcagagtttcggataatc
agctgcaacggagtagttaggtccatccctgctaaagatttcttccttggttatcgtaag
gtggatatggcaagcaacgagatcttactctcggtcttccttccatggacaaggcccttg
gagtacgtgaaagaatttaagcaggcccatcgtagggatgatgatatagctattgttaac
ggtggaatgcgtgtgtttcttgaagagaaaggtcaagaattgtttgtttctgatgcatca
attgcttatggtggtgtggctcctctttcgttgcgtgcgagaaagactgaggagttttta
attggaaagaaatggaataaaggtcttctgcaagatgctcttaatgtcatacagagcgat
gtcttaattaaggaagatgctcctggtggaatggtggagttccggaagtctctaaccctg
agcttcttctttaagtttttcttatgggtttctcatgatgtacataatgtataccccact
atagagactttcccaccctcccatatatcagcggtgcagcctgttcctcggttatctaga
agtgggaaacaagattatgatacagtaaaacaaggaacatctgttggctcgccggaggtc
catctttcagctagaatgcaggtcacaggggaagcagaatatactgatgataccccagtg
cctcctaataccttgcatgctgctttagtgctaagcaaagtgccacacgctctcatcctt
tctattgatgattcagctgccaaatcgtcacttggttttgttggtctgtttcttgccaaa
gatattcctggtgataacatgattggaccagttgttgctgacgaagaattatttgctacg
gacgtggtcacatgtgttggacaagtcattggtgtggttgtcgcagatacacatgagaat
gcaaaaactgcagcaggaaaagttgaagttaaatatgaggagctaccagctatattatca
atcaaggaggctattaatgctaaaagtttccatccgaacacagagaaaaggctaaggaaa
ggggatgttgagctatgctttcaatctggtgagtgtgacaggataatagagggagaagtt
caaatcggtgatcaagaacacttttacttggagcctcatggtagtttggtctggacactg
gatggaggaaacgaagttcatatgatttcatccactcaagctcctcaaaagcaccagaaa
tatgtgtctcatgttctgggtcttccaatgtctaaagtggtatgcaaaacaaaaagaatt
ggaggtggctttggtggtaaagaaacaagatcagctttcattgctgcagcagctgctgtt
ccttcctacctgttgaatcgtcctgtgaagctcatactggacagagatgtagacatgatg
ataactggtcatcgtcacagtttcattggaaagtacaaggttggatttacgaatgaagga
aaaatattggcgttggatcttgaaatctacaacaatggtggaaactctttggatctttcc
cttgctatcctcgaacgtgccatgtttcactcggataatgtttatgagatcccacacgta
aggatcgtagggaacgtttgctttactaattttcccagcaacactgctttccgagggttt
ggagggccccaaggtatgctcattactgaaaactggattcaaagaatcgcagcagagctt
gataaaagccctgaagaaatcaaagagatgaactttcaagaggaaggctccatcacacat
tactctcagtcccttcagtactgcacattacaacagctttggacagagctgaaagcatcc
tccaacttcttaaatgctcgtagagaagctgatgagtttaatagccataatcggtggaaa
aagcgtggtgtagctatagttcccacaaaatttggcatatcattcactacaaagttcatg
aatcaggccggtgctcttgttcatgtttacaccgatgggactgttttggtgacacatgga
ggtgttgagatgggtcaaggattgcatacaaaggttgctcaagttgctgcatccgctttt
aacattccgctcagttcagttttcgtgtcagagacaagcaccgacaaggttccaaatgcg
tcaccaactgctgcatctgcgagctctgatatgtatggtgctgcagttttagacgcctgt
gagcagattatagcaagaatggagcctgttgcttctaagcacagtttcaacacatttgcc
gagctggtaagtgcctgctactttcaacggatagacctatcagctcacggatttcacatc
gttcccgatattggatttgactggatatctggaaaagggaatgcatttagatactacaca
tatggagctgcctttgctgaagttgagatagatactctgactggtgattttcacacaaga
gcagctgatataatgttggacctcggatattctcttaaccctgccattgatgttggacaa
atagaaggagcatttgtacaaggactaggttgggtagctttagaagaactcaaatgggga
gatgcagctcataaatggatacgaccgggaactttactgacttgcggaccaggaaactac
aaaataccttcaattaacgacgttccattcaacctcaatgtttctcttctcaaggggaat
ccgaacaaaaaggcgatacattcatctaaagcagtaggtgagccacccttctttcttgca
tcatcagtcttctttgcgatcaaagaagcgatcaaagctgctagaaccgaggtgggtctc
accaactggttccctctggagactccagccacgccagagcgtatcagaatggcttgtttt
gatgagttttcagctccttttataagctcagacttctcccctaagcttagtgtttga
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