Raphanus sativus (radish): 108844577
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Entry
108844577 CDS
T06014
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor 4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108844577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108844577
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108844577
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SSDB
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Tom22
Motif
Other DBs
NCBI-GeneID:
108844577
NCBI-ProteinID:
XP_018473360
UniProt:
A0A6J0MLJ1
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All DBs
Position
3:complement(13784123..13787004)
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AA seq
406 aa
AA seq
DB search
MEHQDWNFEENYNLSNNRRYIRPQDDLVELLWRDGQVVQQSQTHRDQTQKQDYQQETLRP
NTFLEDQETVSWIQYPLDEDPFESEDLTSPFFSTIDLLQRPASETAKHDASPKPPDQVMP
PPKFRLTDSSSEVRELGKEQYSVVTVGPSHCGSNQSQTVLDGSLRAIDGRPYPNASSSSG
GSSGCSFGKNNKDMACVRRFTAERKRKHIMDTDESVSQSDAIGNNKSSLRTGSTRRSRAA
EVHNLSERRRRDRINERMKALQELIPHCTKTDKASILEEAIDYLKSLQLQVQVMWMGSGM
AAAAAAPIMFPGVQPPPPFIRQVQSPVLLPRFPVMNQYAIQNNPGLVCQNPVQNQVLCNR
FDRYVGLFPQMQAAASQPMEMLRFGSSAGQESQRTSAQTKTTDGTR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccaagattggaattttgaggagaactacaatctgtccaataatagaagatat
ataaggccacaagatgacctggtagagttgttatggcgagatgggcaagtggttcagcag
agccaaactcatagagatcaaactcagaaacaggactatcaacaagaaaccctaagaccc
aacacctttcttgaggatcaagaaaccgtctcttggatccaataccctctagatgaagat
ccatttgaatccgaagacttaacctcacctttcttctcaactatagatctcctccaaaga
ccggcttcagagacggctaagcacgatgccagtcctaaacctcctgatcaggtcatgcct
cctcctaagtttaggttaacggattcatcatcagaagtcagggaactaggaaaagaacag
tactcggtggtgaccgttggaccaagccactgcggtagcaaccaatctcaaaccgttctc
gatggctcactgagagcaatcgatgggaggccctacccgaacgcaagttcgtcatcaggt
ggctcctctggttgcagctttggcaagaacaacaaagatatggcttgtgtaagaagattc
acagcagagcgtaagagaaaacatataatggacactgatgaatctgtgtctcagtcagat
gctattggtaataacaagtcgagcctacgaacaggatcgacgcgaagaagccgtgcagct
gaagttcataatctctccgaaaggaggaggagagataggatcaatgagagaatgaaggct
ttgcaagaactaatacctcactgcactaaaactgacaaagcttcaattttggaagaagcc
atagattatttgaagtcacttcagttacaagttcaagttatgtggatggggagtggaatg
gctgctgctgcagcggctcctattatgttccctggggtacagcctcctccaccgttcatc
cgtcaggtgcagagcccggtactgttgcctagatttcctgttatgaaccagtatgcgatt
caaaacaatcccggtttagtttgtcagaacccggtacaaaaccaagtgttgtgtaatcgg
tttgatagatacgttggcctattcccacagatgcaggctgctgcctctcagccgatggag
atgttgaggtttggttcttcagcgggacaggaaagtcaacgcacgtctgcgcagacgaag
accaccgacggtactcgttag
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