Raphanus sativus (radish): 108845186
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Entry
108845186 CDS
T06014
Name
(RefSeq) transcription factor PIL1-like
KO
K16189
phytochrome-interacting factor
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108845186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108845186
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108845186
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
108845186
NCBI-ProteinID:
XP_056862608
UniProt:
A0A9W3DFW0
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Position
3:complement(10295270..10298947)
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AA seq
414 aa
AA seq
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MGKTPYASLSQPNVISPSSSFKPKLSDQDYMELVCENGQIFAKSRRPNNNGYFQSQRTQS
LLDLYETEYDEDFKKNIKNLGDSQVVPGSEPQHPQQDEETDEQTNDNNNKKKKKIKPSKT
ESERNIWKRNKRSESSKLMNDSLKGLKNIEVTTAPPDEQSVAVGRSRELYIASSSRGTSK
DLNCCSLKKRKYGDMEEEESTYLRNSDNGSDDARIRVTATTRKTVAKRKRSTEGHKLSER
KRRNEISKKMRALQDLLPNVYKDDKVSLLDEAIKYMRTLQLQVQMMSMGNGMISSTSSML
PMGHYSPMGLGMHMGTATTTTSVQPFLPMNVQGTSCFPWINDASSQMLRTFLNHPTGLIP
NSPIFSPLESCSQQFVVPSCFPDETHSTSFTQFSKFASTSNLEDAMQLRGSNGY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaactccatatgcatcattatcccaaccaaacgtaatttctccatcatcgagc
ttcaaaccaaaattaagcgatcaagattatatggaactggtttgtgaaaatggccagatt
tttgcaaagagtcggagacctaacaacaacggttattttcagagtcaacgtacccaatct
ctcttggatttgtatgagaccgagtatgatgaggatttcaagaaaaacatcaagaatctt
ggagactctcaagttgttcctgggagtgagcctcagcacccacaacaagatgaagaaacg
gatgaacaaacgaatgataacaataataaaaagaagaagaagattaagccatccaagacc
gaatctgagagaaatatctggaaaaggaacaaacgttctgagtcatcaaaattaatgaat
gattctttgaaaggtttaaagaatattgaagttaccacagcccctcctgatgagcaatct
gtagctgttggaagatccagggaattgtatattgcgtcttcatctagaggaacttcgaaa
gatctaaattgttgttctttaaaaaagagaaagtatggtgacatggaagaagaagaatca
acttatttacgtaattcggataatggatcagatgatgcgaggatacgagttactgcgaca
acaagaaagactgtggctaagagaaaacgaagcacagaaggccataagttatccgaaaga
aagcgaagaaacgagatcagcaagaaaatgcgtgctttgcaggatctactacctaacgtt
tacaaggatgacaaggtatcattgctggatgaggctatcaaatacatgaggacccttcaa
cttcaagttcagatgatgagtatgggaaatggaatgatatcatctacgagttcgatgttg
ccaatgggtcattactctcccatgggtctaggaatgcatatgggcacagcaacaacaaca
acttcagtacaaccatttcttcctatgaatgtgcaaggaaccagttgttttccgtggatt
aacgatgcatcatcgcagatgctaagaacctttcttaatcaccccacaggactaatccca
aactctcccatcttttctccactggaaagttgctctcagcaattcgttgtgccttcttgt
tttcctgatgagactcattctacctcctttactcaattttcaaagtttgcatcgacatca
aacttagaagatgcaatgcaactcagaggaagcaatggttattga
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