Raphanus sativus (radish): 108848673
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Entry
108848673 CDS
T06014
Name
(RefSeq) triosephosphate isomerase, cytosolic
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00010
Glycolysis / Gluconeogenesis
rsz00051
Fructose and mannose metabolism
rsz00562
Inositol phosphate metabolism
rsz00710
Carbon fixation by Calvin cycle
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
rsz01230
Biosynthesis of amino acids
Module
rsz_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
rsz_M00002
Glycolysis, core module involving three-carbon compounds
rsz_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
rsz_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rsz_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
108848673
00051 Fructose and mannose metabolism
108848673
00562 Inositol phosphate metabolism
108848673
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
108848673
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108848673
Enzymes [BR:
rsz01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
108848673
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108848673
Exosomal proteins of bladder cancer cells
108848673
Exosomal proteins of melanoma cells
108848673
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
AP_endonuc_2
DUF6137
Motif
Other DBs
NCBI-GeneID:
108848673
NCBI-ProteinID:
XP_018477597
UniProt:
A0A6J0MYS3
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Position
4:46846430..46848959
Genome browser
AA seq
254 aa
AA seq
DB search
MARKFFVGGNWKCNGTGEEVKKIVNTLNEAQVPSQDLVEVVVSPPYVFLPLVKSILRPDF
HVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRALLNETNEFVGDKVAYALAQ
GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSNWSNVVVAYEPVWAIGTGKVASPA
QAQEVHDELRKWLAKNVSADVAAATRIIYGGSVNGGNCKELGGQADVDGFLVGGASLKPE
FIDIIKAAEVKKSA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaagttcttcgtcggaggcaactggaaatgcaacggaactggtgaggaggtg
aagaagattgtcaatactcttaacgaagctcaagttccttcccaggatctcgttgaggtt
gtcgttagccctccatatgtgttccttcctctggttaagagcatattgaggcctgacttc
catgttgcggcacaaaactgctgggtcaagaaaggaggtgccttcactggtgaagttagt
gctgagatgcttgtgaacttggacatcccatgggttatccttggtcactctgaaaggaga
gcactcctcaatgaaacaaacgagtttgttggagacaaggttgcctatgctcttgctcaa
ggtttgaaagtgattgcttgtgttggcgagactcttgagcagcgggaggctgggtcgacc
atggatgttgtggctgcccagactaaagctattgctgaccgggtgtcgaactggtcaaat
gttgtcgtagcctatgaaccagtgtgggccattggaaccggaaaggtcgctagcccagcc
caagctcaagaagtacatgatgagctgaggaaatggcttgcaaagaacgtgagcgctgat
gtcgctgctgcaacccgcatcatttatggaggatccgtcaatggtggtaactgcaaggag
ctaggtggtcaggccgatgttgatggtttcttggtcggtggtgcttctctaaagcccgag
tttatcgacatcatcaaggctgctgaggtgaagaaaagcgcttag
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