Raphanus sativus (radish): 108849584
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Entry
108849584 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108849584
KO
K12173
BRCA1-A complex subunit BRE
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108849584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108849584
03036 Chromosome and associated proteins [BR:
rsz03036
]
108849584
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108849584
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108849584
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
108849584
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
108849584
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
108849584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UQ_con
Motif
Other DBs
NCBI-GeneID:
108849584
NCBI-ProteinID:
XP_018478648
UniProt:
A0A6J0N3W2
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Position
4:complement(20809245..20811882)
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AA seq
376 aa
AA seq
DB search
MAFEAFPPLIAAQLHYLLNHSPDSIKIENVRSGNRFNPRILDRFTLVIPYCLDTIKWDVI
YNSEYPAAPPDFIFGPDDEDFMPCSSSTVDSLLDKALSEWNNQDSTLLLVLIQGLRDQYV
AYQRKRVGQVDDDRVKFEISTVITRKGIEMQMTSGADKPEEVKFAVPLVMDMSINKLLVG
CPWKNEQKIYLQVVYPILRKYESAPSSPRLKLVSSSDLKALFSVEDVKLPPWMDGMCLAE
YLPHLEETLERQILEAVSAIALRRSFVEALTLFLGRPLEADPTFCRKASFLAASGPFPFV
VHFFFPTQFPKQQPALMLQSCQHLNQLSEPVKLNLLTDYPWSPRWEVGRMAERLCDFLTD
EAVNFKKYCNEALLQH
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgaagcatttcctcctttaatcgctgctcagcttcactacttactcaaccac
tctcccgattccatcaagatcgaaaatgtgcggtcgggtaacaggttcaatcccagaatc
ctcgatcgttttactttggtcataccgtattgtctggacacgatcaaatgggatgttatt
tacaattcagagtatccagcagctcctcctgatttcatatttgggccagacgatgaggat
tttatgccttgtagcagcagcactgttgattcattactagacaaggctttgtctgagtgg
aacaaccaggactcgacactcctacttgttctcattcaaggattgagggatcaatatgtg
gcctaccaacgaaagcgagtgggtcaagttgatgatgatcgtgtcaagtttgaaattagc
acggttataactcgcaagggaattgaaatgcaaatgacttcaggagctgacaagccagag
gaagtcaagtttgcagtacctcttgtgatggatatgagcataaacaaacttcttgttggg
tgcccctggaagaatgagcagaaaatttatcttcaggtggtatacccgattcttcgaaag
tatgaatcagcaccttcgtcacctcgtctgaaattagtatcatcttctgatttaaaagcg
cttttctctgttgaggatgttaaacttcctccatggatggatgggatgtgcttagctgaa
tatcttccccatctcgaagaaacccttgagagacaaatcctggaagctgtttctgcaatt
gctttaaggaggagttttgttgaggcattgactctttttcttggaagacctcttgaagcg
gatcctaccttttgccgtaaggcatctttccttgctgcctcgggaccatttccattcgtg
gttcacttcttctttccaactcaatttccaaagcagcaaccagctctaatgctccaaagt
tgccagcatttaaaccaattgagcgagccggtaaaattaaacctcctcaccgactaccca
tggagtcctaggtgggaagtggggcgcatggctgaacgattgtgtgacttcctaaccgat
gaagctgtcaacttcaaaaaatactgtaacgaagctctgctccaacattag
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