Raphanus sativus (radish): 108851396
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Entry
108851396 CDS
T06014
Name
(RefSeq) tocopherol cyclase, chloroplastic
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00130
Ubiquinone and other terpenoid-quinone biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01240
Biosynthesis of cofactors
Module
rsz_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
108851396
Enzymes [BR:
rsz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
108851396
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Gene cluster
GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
108851396
NCBI-ProteinID:
XP_018480322
UniProt:
A0A6J0N6M7
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Position
Unknown
AA seq
491 aa
AA seq
DB search
MDTRSLAVSMNTNFTSFDLSRRLSPLRSTKLSPRSIPRASASISTPNSETSPSSGNGINS
EAISVKPVYVPTPPNRELRTPHSGYHYDGTARKFFEGWYFRVSIPEKRESFCFMYSVENP
AFRKRLSPLEVGLYGPRFTGVGAQILGANDKYLCQYTEDSHNFWGDRHELVLGNTFSAMP
GARSPDKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSARWEYSTRPVYGW
GDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGG
FPRKWFWVQCNVFEGAKGEVALTAGGGLRQLPGLTETFENAALVCVHYDGKLYEFVPWNG
VVSWEMSPWGYWYLTAENETHMVELEARTNEAGTPLRAPTSEAGLATACRDSCYGELKLQ
IWERLYDGSKGKVIMEAKSSMAAVEIGGGPWFGTWKGDTSNTPELLKRSLQVPLDLESVF
GLVPFFKPPGL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatactcggagcttagctgtatcgatgaacaccaatttcacctcctttgacctctct
cggcgtttatctcctctccgatcgactaaactatctccccgctccattcccagggcttcc
gcgtctatctccacgccgaacagtgaaacatctccctcctccggaaatgggattaactcc
gaagctatctccgtgaaacctgtttacgtcccgacacctcctaaccgcgagctccggact
cctcacagtgggtaccattacgatggaacagcgaggaagttcttcgagggatggtacttc
agggtttcgatccctgagaagagggagagtttttgctttatgtattctgtggagaatcct
gcgtttaggaagagactctcaccgttggaggttggtctgtatggaccgaggttcactggc
gtgggagctcagattcttggagctaatgataagtatctatgccaatacacggaggactca
cacaacttctggggagataggcatgagctagttttggggaatactttcagtgccatgcca
ggcgcaaggtctccagacaaggaggttccacctgaggaattcaatagaagagtgtctgaa
gggttccaagctacaccattttggcatcaaggtcacatttgcgatgatggcaggactgac
tacgcggaaactgtgaaatcggctcggtgggagtacagtacccgtcctgtctacggctgg
ggtgatgttggggccaaacagaagtctactgcaggctggcctgcagcttttcctgtattt
gagcctcattggcagatatgcatggcaggaggcctttcaacagggtggatagagtggggt
ggtgaaaggtttgagtttagagatgcaccttcttattcagagaagaattggggtggaggc
ttccccagaaaatggttttgggtccagtgtaatgtatttgaaggtgcaaaaggggaagtt
gctttgactgcaggtggcgggttgaggcagttgcccggattaactgagacctttgaaaat
gctgcactggtttgtgtgcactatgatggaaagttgtacgagtttgttccgtggaatggt
gttgttagctgggaaatgtctccatggggttattggtatttgaccgcagagaatgaaacc
catatggtggaattagaggcaagaacaaacgaagcaggtacacctctgcgtgctccaacc
tcggaagctggtttagctacagcttgcagagatagttgttacggtgagctgaagttgcag
atatgggaacggctgtatgatggaagtaaaggcaaggtgataatggaggcaaagagctcg
atggcagcagtggagataggaggaggaccgtggtttgggacatggaaaggagatactagc
aacacacctgagctactcaaacggtcccttcaggtcccattggatcttgaatccgtcttt
ggtttggtccctttcttcaagccacctggtttgtaa
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