Raphanus sativus (radish): 108852951
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Entry
108852951 CDS
T06014
Name
(RefSeq) sphingosine kinase 1-like isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00600
Sphingolipid metabolism
rsz01100
Metabolic pathways
rsz04148
Efferocytosis
Module
rsz_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108852951
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108852951
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
108852951
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Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
PUA
Motif
Other DBs
NCBI-GeneID:
108852951
NCBI-ProteinID:
XP_018481923
UniProt:
A0A6J0NDI2
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Position
4:complement(6143078..6146246)
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AA seq
486 aa
AA seq
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MDTLHPENDRLPSPPLISDRVLINGVITPLTLTADGELQWTESGLRKSTTEKEILSFAVE
GNKVKLKTLVERRGSICCGGSGGDYARKDFVFEPLYDESRKLWCDKLRQRLDSLVGRPKR
LLVFVNPFGGKKTARKIFLEEVKPLFDDAHVQLDVQETKYQLHAKEMVRSIDLSKYDGIV
CVSGDGVLVEVVNGLLERADWRTALKLPIGMVPAGSGNGMIKSLLDPVGLSCSAASATVS
IIRGHRRSLDVATISQGTTKFFSVLMLAWGLVADIDIESEKFRWMGSARFDVYGLQRIIC
LRQYNGRILFVPAPGFESNGKPASYNVDKESSVSDKTVLGYQGPDTNLEDLEWREMKGPF
VSVWLHNVPWGAENTLAAPNAKFSDGFLDLIVMKDCPKLALLSLMTKLSDGTHVQSPYVS
YLKVKAFVLEPGSRIDEEDKEGIIDSDGEVLARGRRSYKCDEKALMSYGKLQITVDQGLA
TLFSPE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggatactcttcacccggagaacgatcgccttccctctccgccgttgatctcagaccga
gttctaatcaacggcgtcatcacgccgttgactttaaccgccgacggagagctacaatgg
acggaatccggtcttaggaaatcgacaacggagaaagagatcctgagcttcgccgtggaa
gggaacaaggtcaaattgaagacgttggttgagagaagaggatcaatctgctgcggagga
agcggtggagattacgcgaggaaggatttcgtgttcgagcctctctacgacgaatctaga
aagctatggtgcgataagcttcgtcaacgcctcgactctctcgtcggtcggcctaagagg
ctgcttgtgtttgtgaacccgtttggtgggaagaagacggcgaggaagatatttttggag
gaagtgaagccgttgtttgatgatgctcatgttcaacttgatgttcaagaaactaagtat
cagttgcatgcaaaggagatggttaggtccattgatttgtcaaaatacgacggtattgtt
tgcgttagcggcgacggtgtccttgttgaggttgtgaatggactgctcgaaagagcagac
tggagaactgccttgaagttgcctattggaatggtccctgcaggaagtggtaatggcatg
ataaaatcattgctggacccggttgggctgtcttgtagtgcagcaagtgctactgtttcc
attatacgaggtcatagacgttctctagatgtggcaactatctcacaagggactaccaaa
ttcttcagcgtcttgatgctagcttggggattagtggctgatatagacatcgagtcagaa
aagttcagatggatgggcagtgctcgctttgatgtctatggtctccagaggataatatgt
ttgagacagtacaatggacgaattctatttgtgccagctcctgggtttgaaagcaatggg
aaaccagccagttacaacgttgacaaggagtcatctgttagtgataagacagtactagga
taccaaggacctgatactaatcttgaagatctggaatggagagaaatgaaaggccctttt
gtttcggtatggcttcataatgttccctggggtgctgagaacactttggctgctcccaac
gcaaagttctctgatggcttcttggatttgattgtgatgaaagattgcccaaagcttgcc
ttgttatcgcttatgacaaagttgagtgatgggacacatgttcaatccccatatgtatcg
tacctaaaggtaaaggcattcgtactggagccaggttcacggatagacgaagaagacaag
gaaggaatcatagattcagacggagaggtattagcaaggggaagaagatcatataaatgt
gatgaaaaggcgttgatgtcttatggcaagcttcaaataacagttgatcaaggtttagca
actctcttctctcctgaatag
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