Raphanus sativus (radish): 108861212
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Entry
108861212 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108861212
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108861212
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108861212
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108861212
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
108861212
Glycosyltransferases [BR:
rsz01003
]
Glycan extension
P blood group
108861212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
108861212
NCBI-ProteinID:
XP_018490545
UniProt:
A0A6J0P1K9
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Position
5:3152149..3153534
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AA seq
417 aa
AA seq
DB search
MFFTKLISSPKMDSEISKKVTAMFDHHRRLNRSGSSLFTAFAASVIALIVFTVVIVSNLS
VRDISEVVKIEIKTVVPYLPLRSEKELSVGNNSNYSITVKENNNLEILKTFGGIGGASEK
FQERATEFLRDDDCEVSFMMTWISPAEMFGKREVLSVESVFKSHPRGCLIILSSTMDSPR
GFSVLRPFLDRGYRVTAVTPDLPFLLKDTAGEAWLEEIRTGKRDPGKISLAQNLSNLVRL
AYLYKFGGVYLDTDVIVLKSFKNLRNVIGAQTLEPVSRNWTRLNNAVLVFDKNHPLLRKC
IEEFALTFNGNVWGHNGPYLVSRVARAVEGTVGYNFTVMTPPAFYSVNWIEIGKLFKVPR
TEKDSKRVQVKVLEMQRRSYGLHLWNKFSSKFEIEKGSAMDKIVSDHCVICENVSVS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcacaaaactgatttcttctccaaaaatggatagtgaaatatcaaagaaagtc
acggctatgtttgatcatcaccggcggttaaaccggtccggatcatcactgttcacagcg
tttgctgcctcggtgatagctctgatcgttttcacggtggttatcgtatctaacttatcg
gtgagagacatctcggaggtggtgaagatagagatcaagacggttgttccttacttgcct
ctgcgatcagagaaagagctaagcgttggcaacaacagtaactacagtatcacagtcaag
gagaataacaatctcgagattcttaaaacttttggaggcataggaggcgcgtcggagaag
tttcaggagagagcgacagagtttctgagagatgatgactgcgaagtcagtttcatgatg
acgtggatctcccctgctgagatgttcggtaagagagaggttctgtccgtggaaagcgtg
tttaaatctcatcctcgtggctgtttgatcattttatcatccacgatggattctcctcga
gggtttagcgtcttgagaccgtttctcgatcgcggttacagagttacggcggtaactcct
gatctgccctttttgctcaaggacacggcgggagaagcatggctcgaggagattcggaca
gggaagagagatcccgggaagatctctttagctcagaatctatcgaacctcgtgaggctc
gcgtacttgtacaagttcggaggtgtttatctggacacggacgtgatagtgctgaaaagt
tttaaaaatctaaggaacgtgatcggcgcgcagaccctcgaaccggtttcgagaaactgg
acgaggttgaacaacgcggttttggttttcgacaagaaccatcctctcttgaggaaatgt
atcgaagagtttgcgttgactttcaacgggaacgtttggggtcataacggaccgtatctt
gtttctagagtggctcgagctgttgaaggaactgttggttataacttcactgtcatgacg
cctcctgcgttttattcggttaattggattgagattgggaagctcttcaaggttccgaga
accgagaaggattcgaagagagttcaagttaaggttcttgagatgcagaggagaagctac
gggttgcatttgtggaataagtttagtagtaagtttgaaattgagaaaggtagtgctatg
gataaaattgtttcggatcattgtgtgatctgtgagaatgtctctgtatcataa
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