Raphanus sativus (radish): 108861532
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Entry
108861532 CDS
T06014
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108861532
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
108861532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Prok-RING_4
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
108861532
NCBI-ProteinID:
XP_018490927
UniProt:
A0A6J0P1K7
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MELRSRNKRSLPSNQENLYEDEVDETHVAIISSDDDSNDSEFQGDEEEDKEDDDDDGNDD
LPNHIPAPAPPPVPAFVPLPLPLPLPRGIKRKSTRVTREKGTLLWEIWEKEDQRWITEHM
TEDVDLNQQNTLIAETAEPPSDLIMPLLRYQKEFLAWASKQEQSVKGGILADEMGMGKTI
QAISLVLAKRDVDRAAVCKEAVGCTLVLCPLVAVSQWLSEIERFTSPGSTKVLVYHGAKR
EKNAEEFKKYDFVLTTYSTVENEFRKCMMSPKEQCEYCNKSFYPAKLIIHNKYFCGPHAV
RTSKQSKQQKKKVATAAATSSKQGKEGDEGEGSKTKRSRKKSKKALEEDQLGSVDRKKSL
LHSITWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQI
RPYSYYFCKDCDCRILDYTAHVSCSSCTHNAVRHFCWWNKYVARPITAYGGHEVGKRAMV
LLKHKVLKDILIRRTKLGRAADLALPPRFITLRRDSLDIKEFDYYESLYQNSQAQFNTYI
EAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSASSGENANLNSENKKEQECGLCHEPAED
SVVTSCAHVFCKACLIDFSASLGQVSCPTCSKLLTVDWTTKAGTEQHANKTTLKGFRASS
ILNRIKLDDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLINYTLGKCGVGCA
QLVGSMSMAARDAAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVEKQ
AQDRIHRIGQYKPIRVVRFIIENTVEERILKLQKKKELVFEGTVGGSQEAIGKLTAEDMR
FLFTT
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgcaataagcgctctcttccatccaaccaagagaatctctacgaa
gacgaagtcgatgaaacacatgttgctataatttcttcagatgacgattcaaacgactct
gagtttcaaggcgatgaagaggaggataaggaagatgatgatgatgatggtaatgatgat
ttaccaaatcatatacccgccccggctcctccccctgtccctgcttttgtgccattgcca
ttgccattgccattgccaagaggcattaaaaggaagagcacacgtgtcaccagagagaaa
ggcaccctcttgtgggagatttgggagaaagaggatcagagatggatcaccgaacacatg
acagaggacgtcgacttgaatcagcagaacacattaatcgccgaaaccgccgagccgcct
tccgatctgatcatgcccttactaaggtaccagaaggagttcttagcgtgggcttcgaag
caggagcaatcagtaaagggaggcattcttgcggacgagatggggatggggaaaaccata
caagccatctctctcgttctcgccaagcgtgacgtcgacagggcggctgtttgtaaagaa
gcggtggggtgcacgcttgtgctttgtcctctcgttgctgtctctcagtggttgagcgag
atcgagaggtttacatcccccggaagcaccaaggtgcttgtgtaccatggggcgaagcgt
gagaagaatgctgaagagttcaagaagtatgactttgtgttgacgacttattcgaccgtt
gagaatgagttcaggaagtgcatgatgtctcccaaggagcagtgtgagtattgcaacaag
tcgttttatcctgccaagcttattatacacaataagtatttttgtgggccccacgctgtg
agaacgagtaaacagtctaagcagcagaagaagaaggtcgctacagcggctgctacgtcg
tccaagcaaggcaaggaaggtgatgaaggagaaggtagcaagacgaagcgatccaggaag
aagagtaaaaaagcattagaggaagatcagcttggttcggtggatagaaagaagtctctt
ttgcattctattacgtggaaccggatcattttggatgaggctcattacatcaaagaaagg
cgtagcaacactgcgagagctgtttttgctttggaggctacctatagatgggctttgagt
ggtactccgttgcagaatcgtgttggagagctttactctctgattcgcttcctgcagatt
cgtccatactcgtattacttttgcaaggactgtgactgtagaatccttgattacactgcg
catgtaagctgcagcagctgcactcataatgcagtgcggcatttctgttggtggaacaag
tatgtggccagaccaataacagcatatggaggccacgaagtgggtaagagagccatggtt
ttgcttaaacacaaagttctgaaagacatcctcataagacgtactaagctgggccgggca
gctgatcttgcccttcctcctagattcatcacattgaggcgggattcactagatataaaa
gagtttgattactatgaatcactataccaaaacagccaagcgcaatttaatacgtatatt
gaggctgggacattgatgaataactatgcacatatatttgatcttctcactcgtctgaga
caggctgttgatcatccataccttgtggtgtattccgcttctagtggagaaaacgctaac
ttgaatagtgagaacaaaaaggagcaagagtgcggtctctgccacgaaccggctgaggac
agtgttgtaacttcctgtgcacacgtgttctgtaaagcttgtttgattgatttctctgca
tccctgggacaagtcagctgcccgacatgctcaaaactactgactgtggattggactacc
aaagctggcacagagcaacatgcaaacaagacaacactaaaaggatttagagcctcaagc
atcttaaatcggataaagctcgatgattttcagacaagtacaaaaatagaggctttgagg
gaagaaataaggttcatgattgaaagagatgggtctgctaaagcaatagttttcagccag
ttcacatcctttttggatctgataaattacaccctcgggaagtgtggggttggttgcgct
caactggtgggaagcatgtccatggcagctagagatgctgccatcaataaattcaaagaa
gatccagattgcagagttttcttaatgagtttgaaagctggaggagttgctctcaaccta
acagtcgcctcacatgtgttcatgatggacccgtggtggaacccagcggttgagaagcaa
gcgcaggacagaatacataggatcggacagtacaagccgatcagggttgtgagattcata
atagagaacacagtggaggaaaggatccttaagcttcaaaagaagaaggaacttgtgttt
gaagggaccgttggtggttctcaggaagccataggaaagttgaccgcagaagacatgagg
tttctgtttaccacctaa
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