KEGG   Raphanus sativus (radish): 108861532
Entry
108861532         CDS       T06014                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108861532
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      108861532
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_2 Prok-RING_4 zf-C2HC_2
Other DBs
NCBI-GeneID: 108861532
NCBI-ProteinID: XP_018490927
UniProt: A0A6J0P1K7
LinkDB
Position
Unknown
AA seq 845 aa
MELRSRNKRSLPSNQENLYEDEVDETHVAIISSDDDSNDSEFQGDEEEDKEDDDDDGNDD
LPNHIPAPAPPPVPAFVPLPLPLPLPRGIKRKSTRVTREKGTLLWEIWEKEDQRWITEHM
TEDVDLNQQNTLIAETAEPPSDLIMPLLRYQKEFLAWASKQEQSVKGGILADEMGMGKTI
QAISLVLAKRDVDRAAVCKEAVGCTLVLCPLVAVSQWLSEIERFTSPGSTKVLVYHGAKR
EKNAEEFKKYDFVLTTYSTVENEFRKCMMSPKEQCEYCNKSFYPAKLIIHNKYFCGPHAV
RTSKQSKQQKKKVATAAATSSKQGKEGDEGEGSKTKRSRKKSKKALEEDQLGSVDRKKSL
LHSITWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQI
RPYSYYFCKDCDCRILDYTAHVSCSSCTHNAVRHFCWWNKYVARPITAYGGHEVGKRAMV
LLKHKVLKDILIRRTKLGRAADLALPPRFITLRRDSLDIKEFDYYESLYQNSQAQFNTYI
EAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSASSGENANLNSENKKEQECGLCHEPAED
SVVTSCAHVFCKACLIDFSASLGQVSCPTCSKLLTVDWTTKAGTEQHANKTTLKGFRASS
ILNRIKLDDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLINYTLGKCGVGCA
QLVGSMSMAARDAAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVEKQ
AQDRIHRIGQYKPIRVVRFIIENTVEERILKLQKKKELVFEGTVGGSQEAIGKLTAEDMR
FLFTT
NT seq 2538 nt   +upstreamnt  +downstreamnt
atggagcttcgttctcgcaataagcgctctcttccatccaaccaagagaatctctacgaa
gacgaagtcgatgaaacacatgttgctataatttcttcagatgacgattcaaacgactct
gagtttcaaggcgatgaagaggaggataaggaagatgatgatgatgatggtaatgatgat
ttaccaaatcatatacccgccccggctcctccccctgtccctgcttttgtgccattgcca
ttgccattgccattgccaagaggcattaaaaggaagagcacacgtgtcaccagagagaaa
ggcaccctcttgtgggagatttgggagaaagaggatcagagatggatcaccgaacacatg
acagaggacgtcgacttgaatcagcagaacacattaatcgccgaaaccgccgagccgcct
tccgatctgatcatgcccttactaaggtaccagaaggagttcttagcgtgggcttcgaag
caggagcaatcagtaaagggaggcattcttgcggacgagatggggatggggaaaaccata
caagccatctctctcgttctcgccaagcgtgacgtcgacagggcggctgtttgtaaagaa
gcggtggggtgcacgcttgtgctttgtcctctcgttgctgtctctcagtggttgagcgag
atcgagaggtttacatcccccggaagcaccaaggtgcttgtgtaccatggggcgaagcgt
gagaagaatgctgaagagttcaagaagtatgactttgtgttgacgacttattcgaccgtt
gagaatgagttcaggaagtgcatgatgtctcccaaggagcagtgtgagtattgcaacaag
tcgttttatcctgccaagcttattatacacaataagtatttttgtgggccccacgctgtg
agaacgagtaaacagtctaagcagcagaagaagaaggtcgctacagcggctgctacgtcg
tccaagcaaggcaaggaaggtgatgaaggagaaggtagcaagacgaagcgatccaggaag
aagagtaaaaaagcattagaggaagatcagcttggttcggtggatagaaagaagtctctt
ttgcattctattacgtggaaccggatcattttggatgaggctcattacatcaaagaaagg
cgtagcaacactgcgagagctgtttttgctttggaggctacctatagatgggctttgagt
ggtactccgttgcagaatcgtgttggagagctttactctctgattcgcttcctgcagatt
cgtccatactcgtattacttttgcaaggactgtgactgtagaatccttgattacactgcg
catgtaagctgcagcagctgcactcataatgcagtgcggcatttctgttggtggaacaag
tatgtggccagaccaataacagcatatggaggccacgaagtgggtaagagagccatggtt
ttgcttaaacacaaagttctgaaagacatcctcataagacgtactaagctgggccgggca
gctgatcttgcccttcctcctagattcatcacattgaggcgggattcactagatataaaa
gagtttgattactatgaatcactataccaaaacagccaagcgcaatttaatacgtatatt
gaggctgggacattgatgaataactatgcacatatatttgatcttctcactcgtctgaga
caggctgttgatcatccataccttgtggtgtattccgcttctagtggagaaaacgctaac
ttgaatagtgagaacaaaaaggagcaagagtgcggtctctgccacgaaccggctgaggac
agtgttgtaacttcctgtgcacacgtgttctgtaaagcttgtttgattgatttctctgca
tccctgggacaagtcagctgcccgacatgctcaaaactactgactgtggattggactacc
aaagctggcacagagcaacatgcaaacaagacaacactaaaaggatttagagcctcaagc
atcttaaatcggataaagctcgatgattttcagacaagtacaaaaatagaggctttgagg
gaagaaataaggttcatgattgaaagagatgggtctgctaaagcaatagttttcagccag
ttcacatcctttttggatctgataaattacaccctcgggaagtgtggggttggttgcgct
caactggtgggaagcatgtccatggcagctagagatgctgccatcaataaattcaaagaa
gatccagattgcagagttttcttaatgagtttgaaagctggaggagttgctctcaaccta
acagtcgcctcacatgtgttcatgatggacccgtggtggaacccagcggttgagaagcaa
gcgcaggacagaatacataggatcggacagtacaagccgatcagggttgtgagattcata
atagagaacacagtggaggaaaggatccttaagcttcaaaagaagaaggaacttgtgttt
gaagggaccgttggtggttctcaggaagccataggaaagttgaccgcagaagacatgagg
tttctgtttaccacctaa

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