Raphanus sativus (radish): 108863294
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Entry
108863294 CDS
T06014
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108863294
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108863294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_C
HEAT
HEAT_GCN1_C
PDS5
HEAT_2
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
108863294
NCBI-ProteinID:
XP_018493173
UniProt:
A0A6J0PAQ5
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Position
5:3061692..3065602
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AA seq
933 aa
AA seq
DB search
MEEANDSVSLTLHTLASIRSLIINADTSVSVISSVFDFLTGLLIRDDSPILHHVLKLLSD
LSLYRNELAPQISDSILSNFLRLRNSDDNNSHGRVAAESLAVLASLSERNPSAAAFSGID
GEAFASICLGAPVSPRMWMIRNAERFRVPSSVLFTLFFGFTKDPYPCIREAALDGLVYVC
EEAGGFVGHVHAVQGCYARAVELLDDAEDSVRSSAVRAVSVWGKVLIASKEESNRRECRD
AVFLQLCSVVRDMSVDVRVEVFKAFGVMRTASESIILQTLSKKVLRAGKGKKPQDHLLNE
SADAAAAAGVFIHGFEDEFYEVREAAVDSFHSLSVNSVEFPDEAVCLLMDMLYDDYMVVR
LKALEALHHIADMGNLKIQETYMPAFLDAIVDTSENIRLTARNILKLAKLPDLKLVNKGV
DGVLKSLEIYPQDEPDILSTLFLLGQNHSNFVVNIIKRFREKLETDSGNKSEFNSQQVSA
FLVFIISAPLSSKQSITSIPPLAFSYSLAMLGKFSCGLHDMMDQDTLLAYLAHCITLSAS
SGKEFSKADMFLNAYRRSNADHSGSPVLPPSKDIPAESKPMASIAELEIVNPALKSVDHI
LLKVKAAWLLLQSECSKEAFRALRACKQELATLTANSSISNGALEFMSQYVHVIELLAQV
WPHFENSRHTSTCRSVELELLMEELEIKLMEIRCRFTGLSTEVSLVMELVILGCLLRLYK
FEICCRLNCKKKLSATVSQLKLHHEQQCTKPSDFVTETDNSLQEIGSSADISSVRLLDLI
KKFNCFSPEQFTLSCNLKCVSAELEVPGNGPYSPISFVAGLPVAIPCEIKLLDVPRDARL
WLRISTSDDTCQFVYFDPNLYSGDEREKRFMFTAVTCMTPRAVVFTLRVSIGIECLFEDV
CCRKHRYGPKHPVAYLCKEREVHFSLVYRTKAL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccaacgactcggtttcactcactctccacactctagcttcaattaggtca
ctcatcatcaacgccgacacttccgtctctgtgatctcctcagtgttcgacttccttacc
ggtcttctcatccgagacgactcgccgattctccaccacgtcctcaagctcctctccgat
ctctccctttatcgaaacgaattagcaccacagatctccgactccatcctatccaacttt
ctccgccttcgaaactccgatgacaataacagccacggacgcgtcgccgcggaatcgctc
gccgtgctcgcgtcgttatccgaacgaaaccctagcgccgccgcgttttccggaatcgac
ggagaggcgttcgcgtcgatctgcctcggagcgcccgtgtctcctcggatgtggatgatt
aggaacgcggagaggttccgcgtcccgtcgtcggtgctcttcacgttgttcttcgggttt
acgaaggatccgtatccgtgtatcagagaagcagctcttgatggattggtttatgtatgc
gaggaggctggtggtttcgtcggtcacgtgcatgccgtgcaaggttgctatgcacgtgct
gttgagcttctagacgatgctgaagatagcgtcagatcttctgcagttcgtgccgttagt
gtgtggggcaaagtgttgatagcatctaaggaagagagtaacagaagagagtgtagggat
gctgtgtttctccagctttgttctgttgtgagagatatgagtgtagacgtgagggttgag
gtcttcaaggcatttggggtcatgagaactgcatcagaaagcattatactgcaaacactt
tctaaaaaagttttgagagcgggaaaagggaagaaaccgcaggatcatcttttgaatgag
tctgctgatgccgctgctgcagctggggttttcatccatggttttgaagatgagttctac
gaggtacgggaagctgcggttgactctttccactccctctcagtaaattctgtcgaattc
ccagatgaagctgtgtgtctattgatggatatgctatacgatgactatatggttgtcagg
ttgaaagctttagaggcattgcatcatatagcagacatggggaacttgaagatacaggaa
acttatatgcccgcctttttggatgctattgttgatacttctgagaacatcagactcacg
gctagaaacattcttaaattggcaaagctgcctgatctgaagctggtcaacaaaggtgtt
gatggtgtcctaaaaagtttagagatatatccacaggacgaacctgatatcttgtccact
ctgttccttttaggacaaaaccattcaaatttcgtagtcaatataatcaagagatttcgt
gaaaagttggagacagattctggaaataaaagtgaattcaacagccaacaggtatctgcg
tttctggtgttcataatctcagctcctctctcaagcaaacaaagcatcacctccataccg
cctttggccttttcatattcgcttgcaatgctgggaaaattctcttgtggacttcatgat
atgatggaccaggatactcttctggcttacttggctcattgcattactctttctgcttct
tcgggtaaagaattcagtaaagcagatatgtttttaaatgcatataggcgcagtaatgca
gatcatagtggaagccccgtcctaccaccaagcaaggatatacctgctgagagcaaaccc
atggcttcaatagcagaactggagattgtaaatccagcactgaagtctgttgaccatata
ctgttgaaagtaaaggctgcctggttattattacaatcagaatgctctaaagaagcattc
cgagcgttaagggcatgcaaacaggagttagcaactttgacagccaattcttcaatctcc
aatggtgcattagaatttatgtctcagtacgttcacgtaatcgaacttctcgctcaggta
tggcctcatttcgaaaactcaagacacaccagcacatgtagatctgtagaactggaactg
ctgatggaagagttagagataaaactgatggagataaggtgtagattcacaggtctgtct
acggaggtgtcacttgtaatggagctagtaattttaggttgcttgttaaggctatataaa
tttgagatatgctgccggcttaactgcaagaagaagctatctgcaacagtatctcaacta
aagctccaccatgaacaacaatgcaccaaaccatcagattttgtaactgaaactgataac
tcattgcaagaaattgggagctctgctgatataagttccgtaagactgcttgatctcatc
aagaaattcaattgcttctccccggaacagtttaccctctcttgtaatctgaagtgtgtc
agtgcagagctcgaggttcctggtaatggtccttacagtccaatttcatttgtggctgga
ctaccagtggctataccgtgcgagatcaagctgctcgatgtgccaagggatgcgcgtttg
tggctgagaatatctacaagtgatgacacttgccagtttgtgtactttgacccaaaccta
tacagtggagatgaaagagagaagaggttcatgtttactgcagtaacttgcatgaccccg
agagctgttgtgttcacattgcgggtctcaataggcatagagtgtttattcgaagatgtt
tgttgcagaaaacatcgttacggaccgaagcatccagtggcttatttgtgtaaggaaaga
gaagttcacttctcccttgtgtacagaaccaaagctctctag
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