Raphanus sativus (radish): 130505650
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Entry
130505650 CDS
T06014
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00906
Carotenoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130505650
Enzymes [BR:
rsz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
130505650
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Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
130505650
NCBI-ProteinID:
XP_056856231
UniProt:
A0A9W3CXB4
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All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MECVGARNFAAMTVTAFPSSRRRFPLVKRYSFMNLRRGLCRVVRASGGGGSGGSESCVAV
REDYADEEDFVKAGGSEITFVQMQQNKDMDEEQSKLVDKLPLISIGDGALDLVVIGCGPA
GLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRDTIVYLDDNNP
ITIGRAYGRVSRRLLHEELLRRCAESGVSYLSSKVESITEAPDGLRLVSCERNTVVPCRL
ATVASGAASGKLLQYELGGPRVCVQTAYGVEVEVENSPYDPEQMVFMDYRDYTNQKARSL
EAEYPTFLYAMPMTKTRVFFEETCLASKDVMPFDLLKKKLMLRLDTLGIRILKTYEEEWS
YIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPTYASVIADILKHESTTSLT
KHINSNISRQAWDTLWPQERKRQRAFFLFGLALIVQLDIGGIRSFFHTFFRLPKWMWQGF
LGSTLTSGDLVPFALYMFVIAPNNLRKGLINHLVSDPTGATMIKTYLRL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgttggtgctcgcaatttcgctgcaatgacggtcacagctttcccgtcttct
cggaggaggtttccgctggtcaaaagatacagtttcatgaatcttcggcgtggtttgtgt
agagtcgtcagagctagcggcggcggaggctccggtggtagtgagagctgcgttgcggtg
agggaggattacgccgacgaggaagatttcgtgaaggctggtggctcggagattacgttc
gttcaaatgcagcagaacaaagacatggatgaagaacagtccaagctcgttgataagtta
cctcttatatcaattggtgatggtgctttggacctagtggttattggttgcggtcctgct
ggtttagccttggctgctgaatcagctaagttaggtctaaaagttggactcattggtccg
gaccttcctttcactaacaactacggtgtttgggaagatgaattcaacgatcttgggttg
caaaaatgtattgagcatgtatggagagatactattgtctatctagacgataacaatccc
attacaattggtcgtgcttatggaagagttagtcgaaggttacttcacgaggagctcttg
aggaggtgtgccgagtcaggtgtctcgtatcttagctcaaaagttgagagcataacagaa
gctcccgatggccttaggctcgtttcctgtgaaagaaacaccgttgttccctgcaggctt
gccactgttgcttctggagcagcttcggggaagctcttgcaatacgaactcggagggcct
agagtctgtgttcaaactgcatacggcgtggaggttgaggtggaaaacagtccatatgat
ccagagcagatggtttttatggactacagagattatacgaaccagaaagctcggagcttg
gaagctgagtatccaacgtttctttacgccatgcctatgacaaagacaagagtgttcttt
gaggagacatgtctggcctcaaaagatgtcatgccctttgatttgcttaaaaagaaactc
atgttgagattagatacactcggaatccgaattctaaagacttatgaagaggaatggtct
tatatcccggtaggtggttccttgccaaacactgaacaaaagaatctcgcctttggtgct
gctgctagcatggtacatcccgccacaggctattcagttgtgagatctttgtctgaagct
ccaacatacgcatcagtcatcgcggatatactaaaacacgagtccactacttccttaacc
aaacacatcaacagcaatatttcaagacaagcttgggatactttatggccacaagaaagg
aaacgacaaagagcattctttctcttcggccttgcactcatagtccaactcgatatcgga
ggcattaggagcttcttccacactttcttccgccttccaaaatggatgtggcaagggttt
ctaggatcaacattaacatcaggagatttggttccttttgctttgtacatgttcgtcatt
gcaccaaacaatttaagaaaaggtcttattaatcacctggtctctgatccaaccggagcc
accatgattaaaacctatctcagactatga
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