Raphanus sativus (radish): 130505786
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Entry
130505786 CDS
T06014
Name
(RefSeq) malate dehydrogenase 1, cytoplasmic-like
KO
K00025
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00020
Citrate cycle (TCA cycle)
rsz00270
Cysteine and methionine metabolism
rsz00620
Pyruvate metabolism
rsz00630
Glyoxylate and dicarboxylate metabolism
rsz00710
Carbon fixation by Calvin cycle
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
Module
rsz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rsz_M00012
Glyoxylate cycle
rsz_M00168
CAM (Crassulacean acid metabolism), dark
rsz_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
130505786
00620 Pyruvate metabolism
130505786
00630 Glyoxylate and dicarboxylate metabolism
130505786
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
130505786
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
130505786
Enzymes [BR:
rsz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
130505786
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
130505786
NCBI-ProteinID:
XP_056856374
UniProt:
A0A6J0NUP3
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All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELID
AAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMTKNVSIYKSQATALEKH
AAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVK
NVIIWGNHSSSQYPDVNHAKVQTSAGEKSVRELVKNDEYLNGEFITTVQQRGAAIIKARK
LSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYDVPAGLIYSFPVTCRNGEWSIV
QGLPIDEMSRKKMDLTAEELKEEKDLAYSCLS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaaccagttcgtgttctcgttaccggtgctgcaggacaaattggatacgct
cttgtcccaatgattgcgaggggaatcatgcttggtgctgaccagcctgtgatccttcac
atgttggatattcctcctgctgctgaagcactcaacggtgtcaagatggagttgatcgat
gctgctttccctcttctcaaaggtgttgttgctacaactgatgccgttgagggatgcacg
ggagtcaacgttgctgttatggttggtggtttcccgaggaaagaaggtatggagaggaag
gatgtgatgaccaagaatgtctccatttacaagtctcaggctactgctttggagaagcat
gccgctccaaactgcaaggttcttgttgttgcaaaccctgcaaacaccaatgcattgatc
ctgaaggaatttgcaccatccatccctgaaaagaacatcagttgtttgacaaggcttgac
cacaacagggccttgggtcagatctccgagaggttgagcgtgcccgtgtctgatgttaag
aacgtgatcatctggggaaaccactcgtcatcacagtacccagacgtcaaccatgctaag
gtgcagacatcggctggagagaagtcagtccgtgagctcgtgaagaacgatgaatacttg
aatggagaattcatcaccaccgttcaacagcgtggagctgcaatcatcaaggcgaggaag
ttgtcaagtgcactttctgctgctagctctgcttgtgaccacatccgtgattgggtcctt
ggaactccagagggtacatttgtttcaatgggagtatactccgatggctcttacgacgtt
ccagctggacttatctactccttccctgtcacttgccgcaatggagagtggagtattgtc
caagggcttccgatcgatgaaatgtcaaggaagaagatggatttgacagcagaggagctg
aaggaagagaaggacttggcctactcatgcctctcttaa
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