KEGG   Raphanus sativus (radish): 130506940
Entry
130506940         CDS       T06014                                 
Name
(RefSeq) DNA repair protein RAD16-like
  KO
K15083  DNA repair protein RAD16
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsz03400]
    130506940
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      130506940
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-RING_2 Prok-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 130506940
NCBI-ProteinID: XP_056857617
UniProt: A0A9W3D1H9
LinkDB
Position
Unknown
AA seq 800 aa
SDEEHDDDDDDGNDDLPAPAPVLAIPVAFHVPLPNANHQPRGTKRKSYQVTREKGKLLWE
IWEKEDEKWVDEHMKDDVDLDHQQNAATIAETAEPPRDLIMPLLRYQREFLAWATKQERS
VSGGILADEMGMGKTVQAISLVLAQREVDRASSKKAVGCTLVLCPLVAVSQWLSEIERFT
SKGSTRVLVYHGAKREKNGNEFKKYDFVLTTYSTVENEFRKCVVPGKKQCEYCSKWFLPN
RLVAHHAYICGPSSEKANKHGGKMINTNPIAVMLRKQAEEEAQEGSSKVKRSKKKSKKQT
LEEEDSVNRKKSVLYSIKWNRVILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNR
VGELYSLIRFLQISPYSYYFCKDCDCRILDYTTHADCHSCPHNAVRHFCWWNKNVANPIT
EPAYGNEERGKRAMILLKDKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKESDYY
ESLYQNSQAQFNTYIEAGTIMNNFAHIFDLLTRLRQAVDHPYLVVYSSSGGANANLNDDN
KKEHECGLCHEPAEDNVVTSCEHVFCKACLIDFSASLGQVSCPTCSTLLTMDWTAKAGIE
QKANKTTIKGFRASSILNRIKLDDFQTSTKIEALREEIRLMVERDGSAKAIVFSQFTSFL
DLINYTLGKCGVGCTQLVGSMSMAARDVAINKFREDPDCKVFLMSLKAGGVALNLTVASH
VFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEEKILKLQNKKELVFEGTVG
GSQEAIGKLTAEDMRFLFTT
NT seq 2405 nt   +upstreamnt  +downstreamnt
tttcggatgaggagcatgatgatgatgatgatgatggtaatgatgatttacctgcccctg
cacctgttcttgctatccctgttgctttccatgtacctttgccaaatgcaaaccaccaac
caagaggcactaaaaggaaaagctatcaagtaacgagagagaaaggcaagctcctgtggg
agatttgggaaaaagaagacgagaaatgggtggacgagcacatgaaagatgacgtcgact
tggaccaccagcagaacgccgccaccatcgctgaaaccgccgagccgcctcgtgatctga
tcatgccgctcctaaggtaccaacgtgagtttctagcgtgggcaacgaaacaagaacgat
cagtctcgggaggcatactagctgacgagatggggatggggaaaacagtacaagccatct
cactcgtcctcgcgcaacgcgaagtcgacagagctagttccaagaaagccgtcgggtgca
cgctcgtgctctgtcccctcgtcgccgtctctcagtggctgagcgagatcgagcgtttca
catccaagggaagcaccagggtccttgtctaccacggtgcaaagagggagaagaacggca
acgagttcaagaagtacgacttcgtgctgacgacgtactccacggtggagaacgagttca
ggaagtgcgtggtgcctggcaagaagcagtgcgagtactgcagcaagtggtttcttccga
acaggcttgtggcgcatcatgcttatatttgtgggccatcgtctgagaaagcgaataaac
atggtggtaagatgatcaatacgaaccctattgctgtcatgctaagaaagcaagccgagg
aggaggctcaagagggtagtagcaaggtgaagcggtctaagaagaagagtaaaaaacaaa
cactagaggaagaagattcagtgaatagaaagaagtctgttttgtactctattaaatgga
accgggtcatcttggatgaggctcattacatcaaagagagacgaagcaacactgcgagag
ctgtttttgctttggaggctacttatagatgggctttgagtggtactcctctccagaatc
gtgttggagagctttactctctgattcgcttcctgcagattagtccatactcttattact
tctgcaaggactgtgactgtagaattcttgactacactacgcatgcagactgtcacagct
gccctcataatgcagttcggcatttctgttggtggaacaagaatgtggcgaacccaataa
cagagccagcttatggaaacgaggagcgggggaagagagccatgatattgcttaaagaca
aagttctgaaagacatactcctaagacgtactaaactgggccgggcagctgatcttgccc
ttcctcctagaatcatcactctgaggcgggataccctagatgtaaaagagtctgattact
atgagtcactgtaccaaaacagccaagcccaattcaatacgtatatcgaggctgggacaa
ttatgaataactttgctcatatatttgatcttctcacccgtctgagacaggctgttgatc
atccatacctcgtggtgtattccagttctggaggtgctaatgctaacttgaatgatgata
acaaaaaggagcatgaatgtggtctctgccacgaaccggctgaggacaatgttgtgactt
cctgtgaacatgtgttctgtaaagcttgtctgattgatttctctgcatccctgggacaag
tcagctgtccaacatgctcaacactactgactatggattggactgctaaagctggcattg
agcagaaggcaaacaagacaacgattaaaggatttagagcctcaagcatcttaaaccgaa
tcaagctcgatgattttcagactagtacaaagatagaggccttgagggaagaaataaggc
tcatggtggaaagagatgggtctgctaaggcaatagttttcagccagttcacatcattct
tggatctgatcaattacacactcgggaagtgtggggttggttgcacccagctggtgggaa
gcatgtcgatggcagctagagatgttgctatcaacaaattcagggaagatccggattgca
aagttttcttgatgagtttgaaagctggaggggttgctctcaacttaacagtcgcttcac
atgtgttcatgatggacccgtggtggaacccagcggttgagaggcaagcacaagacagaa
ttcataggatcgggcagtacaagccaatcagggttgtgagattcataatagagaacacag
tggaggaaaagattctgaagcttcaaaacaagaaggaacttgtgtttgaagggaccgttg
gtggttctcaggaggccataggaaagttgacagcagaagatatgaggtttctgtttacca
cctaa

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