Raphanus sativus (radish): 130506940
Help
Entry
130506940 CDS
T06014
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130506940
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
130506940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130506940
NCBI-ProteinID:
XP_056857617
UniProt:
A0A9W3D1H9
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
SDEEHDDDDDDGNDDLPAPAPVLAIPVAFHVPLPNANHQPRGTKRKSYQVTREKGKLLWE
IWEKEDEKWVDEHMKDDVDLDHQQNAATIAETAEPPRDLIMPLLRYQREFLAWATKQERS
VSGGILADEMGMGKTVQAISLVLAQREVDRASSKKAVGCTLVLCPLVAVSQWLSEIERFT
SKGSTRVLVYHGAKREKNGNEFKKYDFVLTTYSTVENEFRKCVVPGKKQCEYCSKWFLPN
RLVAHHAYICGPSSEKANKHGGKMINTNPIAVMLRKQAEEEAQEGSSKVKRSKKKSKKQT
LEEEDSVNRKKSVLYSIKWNRVILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNR
VGELYSLIRFLQISPYSYYFCKDCDCRILDYTTHADCHSCPHNAVRHFCWWNKNVANPIT
EPAYGNEERGKRAMILLKDKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKESDYY
ESLYQNSQAQFNTYIEAGTIMNNFAHIFDLLTRLRQAVDHPYLVVYSSSGGANANLNDDN
KKEHECGLCHEPAEDNVVTSCEHVFCKACLIDFSASLGQVSCPTCSTLLTMDWTAKAGIE
QKANKTTIKGFRASSILNRIKLDDFQTSTKIEALREEIRLMVERDGSAKAIVFSQFTSFL
DLINYTLGKCGVGCTQLVGSMSMAARDVAINKFREDPDCKVFLMSLKAGGVALNLTVASH
VFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEEKILKLQNKKELVFEGTVG
GSQEAIGKLTAEDMRFLFTT
NT seq
2405 nt
NT seq
+upstream
nt +downstream
nt
tttcggatgaggagcatgatgatgatgatgatgatggtaatgatgatttacctgcccctg
cacctgttcttgctatccctgttgctttccatgtacctttgccaaatgcaaaccaccaac
caagaggcactaaaaggaaaagctatcaagtaacgagagagaaaggcaagctcctgtggg
agatttgggaaaaagaagacgagaaatgggtggacgagcacatgaaagatgacgtcgact
tggaccaccagcagaacgccgccaccatcgctgaaaccgccgagccgcctcgtgatctga
tcatgccgctcctaaggtaccaacgtgagtttctagcgtgggcaacgaaacaagaacgat
cagtctcgggaggcatactagctgacgagatggggatggggaaaacagtacaagccatct
cactcgtcctcgcgcaacgcgaagtcgacagagctagttccaagaaagccgtcgggtgca
cgctcgtgctctgtcccctcgtcgccgtctctcagtggctgagcgagatcgagcgtttca
catccaagggaagcaccagggtccttgtctaccacggtgcaaagagggagaagaacggca
acgagttcaagaagtacgacttcgtgctgacgacgtactccacggtggagaacgagttca
ggaagtgcgtggtgcctggcaagaagcagtgcgagtactgcagcaagtggtttcttccga
acaggcttgtggcgcatcatgcttatatttgtgggccatcgtctgagaaagcgaataaac
atggtggtaagatgatcaatacgaaccctattgctgtcatgctaagaaagcaagccgagg
aggaggctcaagagggtagtagcaaggtgaagcggtctaagaagaagagtaaaaaacaaa
cactagaggaagaagattcagtgaatagaaagaagtctgttttgtactctattaaatgga
accgggtcatcttggatgaggctcattacatcaaagagagacgaagcaacactgcgagag
ctgtttttgctttggaggctacttatagatgggctttgagtggtactcctctccagaatc
gtgttggagagctttactctctgattcgcttcctgcagattagtccatactcttattact
tctgcaaggactgtgactgtagaattcttgactacactacgcatgcagactgtcacagct
gccctcataatgcagttcggcatttctgttggtggaacaagaatgtggcgaacccaataa
cagagccagcttatggaaacgaggagcgggggaagagagccatgatattgcttaaagaca
aagttctgaaagacatactcctaagacgtactaaactgggccgggcagctgatcttgccc
ttcctcctagaatcatcactctgaggcgggataccctagatgtaaaagagtctgattact
atgagtcactgtaccaaaacagccaagcccaattcaatacgtatatcgaggctgggacaa
ttatgaataactttgctcatatatttgatcttctcacccgtctgagacaggctgttgatc
atccatacctcgtggtgtattccagttctggaggtgctaatgctaacttgaatgatgata
acaaaaaggagcatgaatgtggtctctgccacgaaccggctgaggacaatgttgtgactt
cctgtgaacatgtgttctgtaaagcttgtctgattgatttctctgcatccctgggacaag
tcagctgtccaacatgctcaacactactgactatggattggactgctaaagctggcattg
agcagaaggcaaacaagacaacgattaaaggatttagagcctcaagcatcttaaaccgaa
tcaagctcgatgattttcagactagtacaaagatagaggccttgagggaagaaataaggc
tcatggtggaaagagatgggtctgctaaggcaatagttttcagccagttcacatcattct
tggatctgatcaattacacactcgggaagtgtggggttggttgcacccagctggtgggaa
gcatgtcgatggcagctagagatgttgctatcaacaaattcagggaagatccggattgca
aagttttcttgatgagtttgaaagctggaggggttgctctcaacttaacagtcgcttcac
atgtgttcatgatggacccgtggtggaacccagcggttgagaggcaagcacaagacagaa
ttcataggatcgggcagtacaagccaatcagggttgtgagattcataatagagaacacag
tggaggaaaagattctgaagcttcaaaacaagaaggaacttgtgtttgaagggaccgttg
gtggttctcaggaggccataggaaagttgacagcagaagatatgaggtttctgtttacca
cctaa
DBGET
integrated database retrieval system