Raphanus sativus (radish): 130509272
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Entry
130509272 CDS
T06014
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00906
Carotenoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130509272
Enzymes [BR:
rsz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
130509272
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
130509272
NCBI-ProteinID:
XP_056861037
UniProt:
A0A9W3DBC6
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Position
3:22653549..22656383
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AA seq
601 aa
AA seq
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MRSLHVANRVPMVLSLLSSSRLSKALFQVTVKRKHNEERKSQIPSLATYTSIEQRNNGVK
RVSSSSSRLTCKMECVGARNFAAMTVTAFPSSRRRFPLVKRYSFRNLRRGLCRVVRASGG
GGSGGSESCVAVREDYADEEDFVKAGGSEITFVQMQQNKDMDEEQSKLVDKLPLISIGDG
ALDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVW
RDTIVYLDDNNPITIGRAYGRVSRRLLHEELLRRCAESGVSYLSSKVESITEAPDGLRLV
SCERNTVVPCRLATVASGAASGKLLQYELGGPRVCVQTAYGVEVEVENSPYDPEQMVFMD
YRDYTNQKARSLEAEYPTFLYAMPMTKTRVFFEETCLASKDVMPFDLLKKKLMLRLDTLG
IRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPTYASVIA
DILKHESTTSLTKHINSNISRQAWDTLWPQERKRQRAFFLFGLALIVQLDIGGIRSFFHT
FFRLPKWMWQGFLGSTLTSGDLVPFALYMFVIAPNNLRKGLINHLVSDPTGATMIKTYLR
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagatcattacacgtggcgaatagagtccctatggttctatccttgttatcgtcctct
cgtctctctaaagcccttttccaagtcactgtgaaaaggaaacataacgaagaaagaaaa
agccagattccttcccttgctacttatacttcaatagaacagcgcaacaatggtgtgaag
agagtttcttcgtcttcttctcgcttaacttgtaaaatggagtgtgttggtgctcgcaat
ttcgctgcaatgacggtcacagctttcccgtcttctcggaggaggtttccgctggtcaaa
agatacagtttcaggaatcttcggcgtggtttgtgtagagtcgtcagagctagcggcggc
ggaggctccggtggtagtgagagctgcgttgcggtgagggaggattacgccgacgaggaa
gatttcgtgaaggctggtggctcggagattacgttcgttcaaatgcagcagaacaaagac
atggatgaagaacagtccaagctcgttgataagttacctcttatatcaattggtgatggt
gctttggacctagtggttattggttgcggtcctgctggtttagccttggctgctgaatca
gctaagttaggtctaaaagttggactcattggtccggaccttcctttcactaacaactac
ggtgtttgggaagatgaattcaacgatcttgggttgcaaaaatgtattgagcatgtatgg
agagatactattgtctatctagacgataacaatcccattacaattggtcgtgcttatgga
agagttagtcgaaggttacttcacgaggagctcttgaggaggtgtgccgagtcaggtgtc
tcgtatcttagctcaaaagttgagagcataacagaagctcccgatggccttaggctcgtt
tcctgtgaaagaaacaccgttgttccctgcaggcttgccactgttgcttctggagcagct
tcggggaagctcttgcaatacgaactcggagggcctagagtctgtgttcaaactgcatac
ggcgtggaggttgaggtggaaaacagtccatatgatccagagcagatggtttttatggac
tacagagattatacgaaccagaaagctcggagcttggaagctgagtatccaacgtttctt
tacgccatgcctatgacaaagacaagagtgttctttgaggagacatgtctggcctcaaaa
gatgtcatgccctttgatttgcttaaaaagaaactcatgttgagattagatacactcgga
atccgaattctaaagacttatgaagaggaatggtcttatatcccggtaggtggttccttg
ccaaacactgaacaaaagaatctcgcctttggtgctgctgctagcatggtacatcccgcc
acaggctattcagttgtgagatctttgtctgaagctccaacatacgcatcagtcatcgcg
gatatactaaaacacgagtccactacttccttaaccaaacacatcaacagcaatatttca
agacaagcttgggatactttatggccacaagaaaggaaacgacaaagagcattctttctc
ttcggccttgcactcatagtccaactcgatatcggaggcattaggagcttcttccacact
ttcttccgccttccaaaatggatgtggcaagggtttctaggatcaacattaacatcagga
gatttggttccttttgctttgtacatgttcgtcattgcaccaaacaatttaagaaaaggt
cttattaatcacctggtctctgatccaaccggagccaccatgattaaaacctatctcaga
ctatga
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