Raphanus sativus (radish): 130509818
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Entry
130509818 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130509818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130509818
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130509818
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130509818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130509818
NCBI-ProteinID:
XP_056861990
UniProt:
A0A6J0MLY2
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All DBs
Position
3:complement(23573313..23575422)
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AA seq
292 aa
AA seq
DB search
MEMGFQENQQNQELTNLMEIGSGHYGCSHYRRRCKIRAPCCDEVFDCRHCHNEAKDSLQT
EQLLRHDLPRHDVSKVICSLCETEQDVQQNCISCGVCMGKYFCSKCKFFDDDLTKKQYHC
DECGICRTGGEENFFHCKRCRCCYSKVMEDKHRCVEGAMHHNCPVCFEYLFDSTRDITVL
RCGHTMHLQCTKDMGLHNRYTCPVCSKSICDMSNMWKKLDEEVAAYPMPKVYEDKMVWIL
CNDCGSNLNVRFHLIAHKCTSCGSYNTRQTQRGPDATHSCSSGVPQIVGSTG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagatgggtttccaggaaaatcagcaaaaccaagaacttacaaatctcatggagatt
ggatctgggcattacgggtgctcacattacagaagacgatgtaagattagagcaccttgt
tgtgatgaagttttcgattgtagacactgccacaacgaagctaaggactctcttcaaact
gaacagcttcttagacatgatctccctcgacatgatgtttcaaaggtcatttgctcgctt
tgtgagacagaacaagacgtccagcagaactgcatcagttgtggcgtatgtatggggaag
tacttttgctcaaaatgcaagttctttgatgatgatcttaccaagaagcaatatcactgc
gatgaatgtgggatttgcaggaccggaggagaagaaaacttcttccattgcaaaagatgt
cggtgttgctactccaaagtcatggaggacaagcatcgatgtgtagaaggcgcaatgcat
cacaattgccctgtttgttttgagtatctgtttgattccacaagagatatcacggtgttg
agatgtggtcacacaatgcatttacaatgcaccaaagatatggggctgcataaccgatac
acatgccctgtatgttctaaatccatatgtgacatgtctaacatgtggaagaaacttgat
gaagaggttgctgcatacccaatgccaaaagtgtacgaagacaagatggtatggatactt
tgcaatgactgtggttcaaacttgaatgttcggtttcatttgatcgcgcataagtgcact
agctgcggttcctacaacactagacagacgcagagaggacctgatgctactcactcttgc
tcttcaggagttcctcagattgttggttcaaccggttaa
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