Rissa tridactyla (black-legged kittiwake): 128900172
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Entry
128900172 CDS
T09443
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128900172 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128900172 (AP4B1)
Membrane trafficking [BR:
rtd04131
]
Endosome - Golgi transport
Others
AP-4 complex
128900172 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
HEAT_GCN1
PDS5
AP4E_app_platf
Hda_lid
Motif
Other DBs
NCBI-GeneID:
128900172
NCBI-ProteinID:
XP_054036941
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Position
21:complement(7101352..7108856)
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AA seq
740 aa
AA seq
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MPYLGGEDAVRELRRALANPHVQADRLRYRAAVLRVIRHMAQGADVSGLFPEMVKASAAA
DVVQKKLVSLYLRAQAPRQPQLALLAVNTLRKDCGHPSPAVRGLALRSMCGLRMPGIQEY
LQQPLLSGLRDKASYVRRAAVLGCAKMVKLQGDSEVDGALVNELYSLLRDQDPIVVVNCL
RALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLTFLLRYTPRSEEELFDILNLL
DGYLKSSSPSVVMAATKLFLVLAREYPHVQADVLVRVKGPLLSACTSESRELCFTALCHV
RQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKGYCTDVS
VELAQGAIFAIGNIARTYTEQCVGILTELLGLQQEHITSAVVQAFRDLVWLCPQCTDAVC
RALPNCEDAIQDSEGKQALIWLLGAHGEKVPNAPYVLEEFVENMKSEMFPAVKMELLTAL
VRLFLSRPAECQDMLGRLLYYCIEEEMDMAVRDRGLFYYRLLQSGVEEVKRVLCSPKSDP
SLGLLEDQTEQPVNTWASEFNTLAPVYGREHWALVTAHQPAEPPYACSACTDSRNRDTES
LISEGNKEVLNVHPETGSLTLIPDVYLTAEQFEKTWLSLDTSCHLSLPWCGTVHPDTIQT
ALHVVHIQTIAMSKAGVQPWKAYLSAQDDTGCLFLTELLLEAADSEMQVLVKQSEAKPEA
LQTFILALRTVMGTVAGLGS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacctgggcggcgaggacgcggtgcgggagctgcgccgggccctggccaacccg
cacgtgcaggcggatcggttgcgttaccgcgccgccgtcctgcgcgtcatccggcacatg
gcgcagggcgcggacgtgtcggggctgttcccggagatggtgaaggccagcgcggcggcc
gacgtggtgcagaagaagctggtgtcgctgtacctgcgggcgcaggccccgcggcagccg
cagctggcgctgctggccgtcaacacgctccgcaaggactgcggccaccccagccccgcc
gtgcgggggctcgccctccgcagcatgtgcggcctcaggatgcccggcatccaggagtac
ctgcagcagcccctcctcagcggcctgcgggacaaggcctcctacgtgaggagagcggcc
gtgctgggctgcgccaagatggtgaagctgcagggggactccgaagtcgatggtgcattg
gtgaacgagctgtacagtttgcttcgtgatcaggatcccattgtagttgtgaattgtctg
agggccttagaagagatattgaagaaagagggaggagttgtcatcaacaaacccattgct
caccatctcctcaacaggatggcagacctggatcagtgggggcaaagtgaggtgcttacc
ttccttctgcgttacacacctcgcagcgaggaggagctcttcgacatactcaatttattg
gatggctatctcaaaagcagcagccccagtgttgtgatggcagccaccaagcttttccta
gtgctggccagggagtacccacatgtgcaggcagatgttttggtgagagtgaaggggcca
ctgctgtcggcctgcacctccgagagcagggagctctgcttcactgcgctgtgccatgtg
cgtcagatcctcggtagccttcccggccattttagcagccactacaaaaagttcttctgt
tcatattcagagccccactacatcaaatgccagaagatggaggtgttgtgtgagctggtg
aatgatgaaaacgtacagcaagtgctggaggagctgaagggctattgcactgatgtctcg
gtagagcttgcccagggggcgatcttcgccataggcaatattgctaggacatacacagaa
cagtgcgtggggattctgacagagctcctggggctgcagcaggagcatatcacttcagcg
gtagtacaggcttttcgggacctggtgtggctgtgtccgcagtgcacggatgcggtgtgt
cgggcactgcctaactgtgaggacgccatccaggacagtgagggcaagcaagcgctgatc
tggctcctgggtgcacacggtgagaaagtaccgaatgccccctatgttttagaggagttt
gtggagaacatgaagtcagagatgttcccagcagtgaagatggagcttctgacagcattg
gtgcgactcttcctgtctcgtcctgccgagtgtcaggacatgctggggaggctgctctat
tactgcatagaggaggagatggatatggcagtacgagaccgtggattgttctactatcgc
cttttgcagtccggtgtggaagaagtgaaacgggtcctgtgtagccccaagtctgacccc
tctctggggctcctggaagaccaaactgagcaacccgtgaatacctgggcttcagagttt
aatactcttgcaccagtttatggcagagaacactgggcactcgttactgctcaccagcca
gcagaacccccttacgcttgttctgcttgtactgactccaggaacagagacacagagtcg
ctgatttctgaagggaataaagaagtccttaatgttcatcctgagacaggcagcctgacc
ttaattcctgatgtttacctgactgcagaacagtttgagaagacctggctgagcttggac
acgagctgccacctctctctgccctggtgtgggactgttcacccagataccatacagacg
gcccttcacgttgtccatatccagaccattgctatgagcaaagctggtgtccagccgtgg
aaagcttatctcagtgctcaagatgacacaggatgcctcttcctaacagagctcttgctg
gaggcggcagattcggagatgcaggttttggtgaagcagagcgaggcgaagccggaggca
ctgcaaaccttcattttggcgttaaggacggtcatggggacagttgccggactggggtcc
tga
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