Rissa tridactyla (black-legged kittiwake): 128900376
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Entry
128900376 CDS
T09443
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128900376 (PKP1)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
128900376 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
HEAT
HEAT_EZ
Adaptin_N
HEAT_2
V-ATPase_H_C
ARMC9_ARM
Mo25
Arm_2
Motif
Other DBs
NCBI-GeneID:
128900376
NCBI-ProteinID:
XP_054037431
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All DBs
Position
21:complement(1075949..1118548)
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AA seq
734 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTSRGSYYAKTQTGNSSWGYPLYNGTLKRDVENRRYSSYS
QMEGWGSKHYSKAVCSPARAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKSQVGGRAEHK
ATLNRQSIYSSCSTQQGTTRTSKKMPARALSCPSSNKPDVVYAQPMMSCKQDVVYGQTQS
GSKICGDEIDGGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAK
LVELLRSTNQNVQRAAAGALRNLVFKNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLT
GLLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGSCNRTREIIDPEVFFNATGCLR
NLSSADMGRQTMRNYPGLIDSVMTYAQNCVASNRPDDKSVENCICILHNLSYRLDAEVPN
KYTQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTY
LSLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQMIGLKEKGLPRIARLLQSNSSEVV
RSGASLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSGNTNSYGEIMTSACYTLRNLIMSN
PHLGKSYLTSNMLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMG
SLAGTTFRTLSSRF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctccgctgaaaacggcgctggcgtatgagtgtttccaagaccaggccagc
tccacgctggctctgccctcggaccacaagctgaaaacgaagggcacgggaaaacagcgg
gtccaagagcaagtgatgatgacggtgaagcggcagaagcaaaagtcgtctgtgtcgtcg
agcgtgggccactccaaccgaggttccatgtacgatggtttagctgatggttatggctac
gggacatcccggggcagctattatgccaaaacccaaacaggaaacagcagctggggatat
ccgttgtacaacgggaccctgaagcgggacgtggagaaccggcgctacagctcatacagc
cagatggagggctggggcagcaagcactacagcaaggctgtctgcagccccgccagggct
ggcagcgactactgctttgtgcagaacatcaagagcagccggagtgagcccgacctctac
tgcgaaccaccccggggcacgctgaggaagagtcaggtggggggccgggcagagcacaag
gcaaccttgaaccgccagagcatctacagcagctgcagcacccagcaaggaactaccagg
acaagtaaaaaaatgccagcacgggccctctcctgcccctcaagcaacaagcccgatgtg
gtctatgcccagcccatgatgagctgcaagcaggacgtggtttatggacagactcagtcc
ggctccaaaatttgtggtgatgagatagacggcggtacaatgaccatccagaaagccata
caacttctgtgctcctctgatgacaaataccaggccatgggtgcttactacctccagcac
acctgcttccaggatgagtctgccaagcaagaggtctatcggctggggggaatcgccaag
ctcgtcgagctgctccgcagcacaaaccagaacgtacagcgtgcagcagctggagccctc
cgaaatttggtcttcaagaatccaaccaacaagatagaaacccggcggcagaatgggata
agggagtgcgtgagccttctacgaaggacagggaacactgaaattcagaaacaactgaca
ggactgctctggaacctctcctccaccgatgaattaaaagaagagttgatacaggaggcc
ctccccgtcttgacggattgtgttatcatccctttctctggctggtctgatggcagctgc
aacaggacaagggaaattattgacccagaagtattcttcaatgctacaggctgtttgaga
aacttgagttctgcagacatggggcgccagaccatgaggaattaccctggcttgatcgac
tcagtcatgacttacgcccagaactgcgtggcttctaaccgacctgatgataagtctgtg
gagaattgcatctgcatcctgcacaacctctcctaccgcctggatgctgaagttcccaac
aaatacacccagctcaaccacatggcccggagcgtttatatggacaaaactctcacaggc
tgtttcaacagcaggagtggtaaaatggagaatgatgagtacggtgtcccccttcctgag
gaggattttaaacccaaaggacccagctggctctaccactctgatgccatccgcacctac
ctgtccctgatggatcagagcaagaaggatgccaccttggaagcttgtgctggagctctg
cagaacctcactgcgagccgaggactgatgtccaacgcaatgagtcaaatgattggtttg
aaggaaaaaggtttgcctcgcatagcacggctcctccagtccaacagctctgaagttgtc
cggtctggggcttctttgctgagcaacatgtcccggcatcctgttctccacaaaaccatg
gctcaccaggtgctcccagatgtatcacgtctcctgtcattccagtctggaaataccaac
agctatggcgagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaac
ccacacctgggaaagtcttacttgaccagcaacatgctaaataatgtagtaagcctgtgc
cgaaatggctcctgtccgaaagcggccgaagctgctcgcctcctcctgacagacctctgg
tcgaacagggagctccagagtgtgctgaagcagcaaggatttgataagaacatgatggga
tctttagctggaacaaccttcaggaccctctcctccagattttag
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